Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001741255.1_202016-09- 21] 221 sequences; 12,094,692 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq12 197 2e-45 seq9 129 1e-24 seq11 114 2e-20 >seq12 Length=1046806 Score = 197 bits (218), Expect = 2e-45 Identities = 186/237 (78%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| |||||||||||||||| | |||| |||||| |||| |||||| ||| || Sbjct 63074 AATTTGCATACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTT 63133 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||| || || | ||||||| || || | ||| || ||||||||||| ||||| ||||| Sbjct 63134 ATAATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTG 63193 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| ||||| || ||||| || ||||| ||||| |||| | || |||||| ||||| Sbjct 63194 ATCTGGAGGAATACCTTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGA 63253 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||| ||||| ||||| |||||||| || |||||||| ||||| || || |||||||| Sbjct 63254 AGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 63310 Score = 188 bits (208), Expect = 1e-42 Identities = 184/237 (78%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| |||||||||||||||| | ||||| || | |||| || || || || Sbjct 62846 AATTTGCATACCACCTCTCAATCTCAACACCAGGTGAAGAGTAGATTCCTTTTGGATGTT 62905 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||||| || || |||||| ||| |||| ||| || || |||||||| ||||||||||| Sbjct 62906 GTAGTCAGACAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTG 62965 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| ||||| || |||||||||||||| || || |||| | || |||||| ||||| Sbjct 62966 ATCCGGAGGGATACCTTCTTTATCTTGAATCTTACTTTTGACGTTGTCAATAGTGTCGGA 63025 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||| ||||| ||||| |||||||| || |||||||| ||||| || || |||||||| Sbjct 63026 AGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 63082 Score = 152 bits (168), Expect = 9e-32 Identities = 171/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 193132 TACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGG 193191 ||||||| ||||| | | || || || | || | ||| || |||||| ||||| | Sbjct 62626 TACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCG 62685 Query 193192 ATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAG 193251 | | ||||||| ||| |||| ||| || ||||||||||| ||||| || || || |||| Sbjct 62686 ACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAG 62745 Query 193252 GTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAA 193311 | || ||||| || ||||| ||||| | || | || |||||| || ||||| |||| Sbjct 62746 GAATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAA 62805 Query 193312 CTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | ||||| |||||||| |||||||| || || || || || |||||||| Sbjct 62806 CCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACGAAAATTTGCAT 62854 Score = 147 bits (162), Expect = 4e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192 |||||||||||||| | |||| || | |||| || || || || |||||||| Sbjct 494008 ACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGA 493949 Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252 || |||||| ||| || ||||| || || ||||| || ||||| ||||| ||||| || Sbjct 493948 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 493889 Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312 || ||||| || ||||| || |||| || | ||| |||||| || ||||| ||||| Sbjct 493888 AATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 493829 Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 ||| || || ||||| ||||| |||| || || || || |||||||| || Sbjct 493828 TTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 493778 Score = 138 bits (152), Expect = 2e-27 Identities = 178/245 (73%), Gaps = 2/245 (1%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||| | | || || ||||| || || | ||| || ||| || || || Sbjct 63537 ATACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCA 63596 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | ||||||| || |||| || || |||||||| || ||||| |||||||| ||| Sbjct 63597 GACAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGA 63656 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || ||||| ||||| | || | || || ||||||||||| ||| Sbjct 63657 GGGATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCA 63716 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT--TTTATTAG 193368 ||||| | ||||| |||||||| || | || || || || || ||||| | |||||| Sbjct 63717 ACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATAATCTATTAG 63776 Query 193369 TAAAA 193373 | ||| Sbjct 63777 TTAAA 63781 Score = 125 bits (138), Expect = 1e-23 Identities = 170/237 (72%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| |||||||||||||||| | |||| || | |||| || || || || Sbjct 63302 AATTTGCATACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTT 63361 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||||| || || |||||| || |||| || || |||||||| || || |||||||| Sbjct 63362 GTAGTCAGACAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTG 63421 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| ||||| || ||||| || || || ||||| | || | || || || ||||| Sbjct 63422 ATCTGGAGGGATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGA 63481 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || ||||| |||| ||| || |||||||| || | || || ||||| || ||||| Sbjct 63482 GGATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 63538 >seq9 Length=431220 Score = 129 bits (142), Expect = 1e-24 Identities = 161/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||||||||||| | || | ||||| || | ||||| ||| || ||||| Sbjct 71083 ATACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCA 71024 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || || |||||| || || ||||| || || ||||| || ||||| ||||| ||||| Sbjct 71023 GACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGT 70964 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || ||||| || || | || | ||| |||||| || ||||| ||| Sbjct 70963 GGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCA 70904 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAA 193351 ||||| | ||| || || ||||| || | || || ||||| Sbjct 70903 ACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 70863 >seq11 Length=644577 Score = 114 bits (126), Expect = 2e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||| |||| | |||| ||| || || | || || || || ||||| Sbjct 616913 ATACCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCA 616972 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 |||| |||||| || || ||||| || || ||||| || ||||| ||||| ||||| Sbjct 616973 GATAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGT 617032 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || ||||| || |||| || | ||| ||| || || ||||| ||| Sbjct 617033 GGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCA 617092 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGT 193336 ||||| | ||| || || ||||| || Sbjct 617093 ACTTCCAAAGTGATGGTCTTACCAGT 617118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899651914704720