Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001741285.1_202016-09- 21] 45 sequences; 12,172,642 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq9 199 1e-45 seq5 196 1e-44 seq15 122 2e-22 >seq9 Length=439289 Score = 199 bits (220), Expect = 1e-45 Identities = 1069/1681 (64%), Gaps = 49/1681 (3%) Strand=Plus/Minus Query 363364 TATGAGAAGGATCTCGAGTATGATATTTTCGGATATAAGACGATGGAGAAATCCTACCTA 363423 || || | |||| || ||||| |||||||| ||||| ||||| || ||| | Sbjct 239183 TACGATAGGGATTTCCAGTATACGTATTTCGGATTCAAGACACTGGAGCGTTCGTACTTG 239124 Query 363424 TCTCGTATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATT 363483 | | || ||||| | | ||||| || |||||| || |||||||||| || | Sbjct 239123 CTAAGACTGAACGGTGAAGTGGCAGAACGTCCTCAGCATTTGGTAATGCGTGTGGCGCTA 239064 Query 363484 GGTATCCATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGT 363543 ||||||||| | ||| | || | | | | | || ||||| || | || | Sbjct 239063 GGTATCCATGGTAGCGATATCGAATCTGTGCTGAAGACTTATAA--TTTGATGTCGTTAA 239006 Query 363544 G-TA-TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGT 363601 | || ||||| ||||| | ||||| | | ||| ||||| || | |||| || |||| Sbjct 239005 GATACTTCACTCACGCTTCCCCAACTTTATTCAACGCTGGTACGCCACATCCTCAAATGT 238946 Query 363602 CTTCTTGCTTTCTTC-TAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTT 363660 |||| || |||||| | |||||||| || || ||||| ||||| | ||| || | Sbjct 238945 CTTCATG-TTTCTTAATTGCCATGAAGGATGACTCTATCGAAGGTATTTATGATACTTTG 238887 Query 363661 AAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTT 363720 || | |||||| | |||||||| | |||||| || ||||| | ||| |||| | Sbjct 238886 AAAGAATGTGCTATGATTTCCAAAACTGCAGGTGGTGTTGGTCTTCATATCAACAACATC 238827 Query 363721 CGTGC-ACAGAACAGTTACATTCGC-GGCACAGGGGGATACT-CGAATGGGCTGGTTCCC 363777 ||| | |||| ||| || ||| || || || |||| | || ||| || |||| Sbjct 238826 CGTTCCACAGGTTC-TTATAT-CGCTGGTACCAACGG-TACTTCAAACGGGTTGATTCCT 238770 Query 363778 ATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAA 363837 ||| ||||||| || | |||||||| | || || ||||||||||| ||| | Sbjct 238769 ATGATTCGTGTTTTCAATAATACTGCCCGTTATGTGGACCAGGGTGGTAACAAGAGACCT 238710 Query 363838 GGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTC 363897 || || || || | | | ||||| ||||| ||||| || || ||| | || || Sbjct 238709 GGTGCTTTCGCCCTTTTCTTGGAGCCATGGCATGCAGATATCTTCGACTTTGTCGATATC 238650 Query 363898 CGGAAAAACACG-GGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGT 363956 | |||||||| || || || ||| | |||||| | ||| ||||| ||| || ||| | Sbjct 238649 AG-AAAAACACATGGTAAGGAAGAAATTCGTGCAAGAGATTTGTTCCCTGCTCTATGGAT 238591 Query 363957 TTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACA 364016 |||| | ||| ||||| || || | | | | | |||| | | |||| || || Sbjct 238590 CCCTGATCTTTTCATGAAACGTGTTCAAGAGGATGGGCCTTGGACTTTGTTTTCGCC-CA 238532 Query 364017 CGAATGTCC-AGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGT 364075 || || |||| | ||||| |||||||| || | || | ||||| | Sbjct 238531 GTGCTGCCCCAGGTTTAGATGATGTGTGGGGTGATGAATTTGAAGAACTATATACTCGTT 238472 Query 364076 ATGAATCGGAGGGAAAGGC-TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATC 364134 | ||| || ||| | | | |||| |||||| || || ||| | |||| |||||| Sbjct 238471 ACGAA----AGAGAAGGTCGTGGTAAAACAATTAAAGCCCAAAAGTTGTGGTATGCCATT 238416 Query 364135 ATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGC 364194 || | | |||| || ||||| ||||| | ||| | || || || | || ||| | Sbjct 238415 TTGCAAGCACAGACAGAAACAGGTACACCTTTCATGGTTTATAAGGACGCATGTAACAGG 238356 Query 364195 AAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTAT 364253 ||| | ||||| ||| || | ||||| || || | | || ||||| || || | Sbjct 238355 AAGACAAACCAACAGAACTTAGGTACTAT-CAAATCATCTAATTTATGTTGTGAAATCGT 238297 Query 364254 TGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGC 364313 ||||| || | || || || ||||| || ||||| | || || || || || || || Sbjct 238296 CGAATATTCCTCCCCGGATGAAACTGCAGTTTGTAATTTAGCTTCTATTGCCCTACCAGC 238237 Query 364314 GTTTGT---------AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAAC--- 364361 || || | ||||||||| || | | || | | || | || Sbjct 238236 ATTCGTTGAGGTTTCAGAAGATGGTAAAACTGCAAGCTATAATTTCGA-GAGATTACACG 238178 Query 364362 ------CTA---TCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCC 364412 ||| |||| |||| ||| | ||| ||||||||| ||||| ||||| Sbjct 238177 AGATTGCTAAAGTCAT--TACTCACAACTTGAACAGAGTTATCGACCGTAATTACTATCC 238120 Query 364413 AATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGG 364472 | |||| || || ||| |||||| ||| | || |||| ||||||||| ||||| Sbjct 238119 AGTTCCCGAGGCTAGAAATTCAAATATGAAGCATAGACCTATTGCTCTTGGTGTCCAGGG 238060 Query 364473 CCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCT 364532 | || || || ||||||| | | | ||||| ||| || |||| ||| Sbjct 238059 TTTGGCCGATACTTATATGATGTTGCGTCTACCCTTTGAATCGGAAGAAGCTCAAACTCT 238000 Query 364533 AAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGC 364592 ||| || | ||||| ||||| || || ||| | | || || ||||| ||||| Sbjct 237999 AAACAAACAAATCTTCGAAACTATTTACCATGCTACTCTTGAAGCCTCCTGTGAATTGGC 237940 Query 364593 A-AAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCC 364651 |||| |||| ||| || ||||||| ||| || || || ||| |||| | || | Sbjct 237939 CCAAAAAGAAGGTAAA-TATTCTACTTTTGAAGGTTCTCCAGCTTCTAAGGGTATTTTAC 237881 Query 364652 AGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCA 364711 | || ||| | ||||| | | |||| || | ||| | ||||| || || | Sbjct 237880 AATTCGATATGTGGAACGCTAAACCATTTGGCATGTGGGATTGGGAAACCTTAAGAAAGG 237821 Query 364712 ACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTA 364771 || || || ||||| | ||||| | || || || ||||| || || || | Sbjct 237820 ACATTGTTAAACATGGGTTAAGAAACTCTTTGACTATGGCACCAATGCCAACCGCCTCAA 237761 Query 364772 CTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCAC 364831 || | || || || || | || || ||||||||||| | || || | || || | Sbjct 237760 CTTCCCAAATTCTTGGTTATAATGAATGCTTCGAACCAGTGACCTCAAACATGTACTCTC 237701 Query 364832 GCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCG 364891 | || || || || || ||||| | || |||||| || || | ||| | || Sbjct 237700 GTCGTGTCCTGTCTGGTGAATTCCAAGTTGTTAATCCATATTTACTACGTGATTTAGTCG 237641 Query 364892 ACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGC 364951 ||| || | |||| ||| || ||||| | ||| | || | ||||||||| | | Sbjct 237640 ACCTGGGTATTTGGGATGATAGTATGAAACAATATCTAATTACACAAAATGGTTCTATTC 237581 Query 364952 AGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTT 365011 | | | ||| | ||| |||| ||||| | ||||||||||| |||||||| | Sbjct 237580 AAGGCTTACCAAATGTGCCACAAGAATTGAAGGAATTATACAAAACCGTCTGGGAAATCT 237521 Query 365012 C 365012 | Sbjct 237520 C 237520 >seq5 Length=575714 Score = 196 bits (216), Expect = 1e-44 Identities = 975/1536 (63%), Gaps = 59/1536 (4%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 || || |||||| | ||||| ||| |||||| || |||| || || || ||||| ||| Sbjct 301400 TTTACTCACGCCTCTCCAACGTTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCT 301459 Query 363607 TGCTTTCTTC-TAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAA 363665 || |||||| | |||||||| || || |||||||| || | ||||| | ||| | Sbjct 301460 TG-TTTCTTGGTTGCCATGAAGGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGA 301518 Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC 363725 |||||| | |||||||| | ||| || || |||||| || ||||| || ||||| | Sbjct 301519 ATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTACATATCCATAACATTCGTTC 301578 Query 363726 ACAGAACAG----TTACATTCGCGGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATG 363780 | || | ||||||| || ||| || |||| | || || | |||| ||| Sbjct 301579 A----ACTGGTTCTTACATTGCTGGTACAAACGG-TACTTCTAACGGTTTAATTCCTATG 301633 Query 363781 CTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGG--AGGAAAGCGCAAAG 363838 ||||||| || | || || || | || || ||||||||||| | |||| | | Sbjct 301634 ATTCGTGTTTTCAATAACACCGCCCGTTATGTTGACCAGGGTGGTAATAAAAGACC--TG 301691 Query 363839 GGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCC 363898 | |||||||| | || || || || ||||| ||||| ||||| ||| |||| | Sbjct 301692 GTGCGTTTGCCCTTTACCTGGAACCATGGCATGCTGATATCTTTGATTTTATTGATATTA 301751 Query 363899 GGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTT 363958 |||| ||| || ||||||||| | |||||| | ||| ||||| ||| || ||| || Sbjct 301752 GGAAGAACCACGGTAAAGAGGAAATTCGTGCAAGAGATTTGTTCCCTGCTCTATGGATTC 301811 Query 363959 CTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACG 364018 |||| | ||| |||||||| || || | | | || ||| || | || | ||| Sbjct 301812 CTGATCTTTTCATGAAGCGTGTCGAAGAAAATGGGACCTGGACATTATTCTCTCCAACAT 301871 Query 364019 AATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATG 364078 | ||| ||| | |||| | |||||||| | || |||||||| || | Sbjct 301872 CAGCTCCTGGTTTAAGCGATTGTTACGGTGACGAGTTTGAGGCTCTATATACCCGCTACG 301931 Query 364079 AATCGGAGGGAAAGGC-TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATG 364137 | || ||| | | | ||||||| || || || || |||||| | |||| || Sbjct 301932 A----GAAAGAAGGTCGTGGTAAGACTATCAAAGCCCAAAAATTATGGTATTCCATTTTG 301987 Query 364138 GATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAG 364197 || | || | ||| || || ||||| | | | ||||| ||| | || ||| | || Sbjct 301988 GAAGCTCAAACTGAAACTGGTACACCTTTCGTTGTTTACAAGGATGCTTGTAACAGAAAA 302047 Query 364198 TCCAACCAGCAGCACCTTGGT----ACAATTCAGCAGAGCAACCTATGTACCGAGATTAT 364253 || || || | || | ||| ||| ||| || ||| |||| || ||| | Sbjct 302048 TCTAATCAAAAAAACTTAGGTGTCATCAAGTCATCA----AACTTATGCTGTGAAATTGT 302103 Query 364254 TGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGC 364313 ||||||| | ||||| || || ||||| || |||||| | || || | || | || || Sbjct 302104 TGAATACTCAGCTCCAGATGAAACTGCTGTTTGTAACTTGGCTTCCGTTGCCTTACCAGC 302163 Query 364314 GT---TTGTAA------AAGATGGT---ACTTTTGACCAC---CAGCATC-------TTT 364351 | ||| || | |||||| |||| |||| || | || | Sbjct 302164 ATTCATTGAAACTTCTGAGGATGGTAAGACTT----CCACATACAACTTCAAAAAATTAC 302219 Query 364352 ATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATC 364411 |||| | | | || |||| | ||| | ||| || || || ||||| || | Sbjct 302220 ATGAAATTGCTAAAGTTGTTACTCGTAATTTAAACAGAGTCATTGATCGTAATTACTACC 302279 Query 364412 CAATTCCTGAAGCCGAG-CGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAG 364470 | || |||| |||| || |||||| | ||| | || |||| | | ||||| || Sbjct 302280 CTGTTGAAGAAG-CGAGAAAATCCAATATGAGACATAGACCAATTGCTTTGGGTGTTCAA 302338 Query 364471 GGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTT 364530 || ||||||||| ||| ||| || | || |||||||||| || || ||| | Sbjct 302339 GGTCTCGCTGACACTTTCATGCTGTTACGTTTGCCATTTGATTCTGAGGAAGCCCGTTTG 302398 Query 364531 CTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTG 364590 ||||||| | ||||||||||| || ||| |||| | ||| ||||| ||||| | Sbjct 302399 CTAAATATCCAAATCTTTGAAACTATTTATCATGCCTCCATGGAAGCTTCTTGTGAACTA 302458 Query 364591 GCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTC 364650 || | | | || ||| |||| | || || ||| ||| || || | | | Sbjct 302459 GCTCAGAAGGACGGTCCATACGAAACTTTCCAAGGATCTCCTGCTTCTCAAGGTATACTA 302518 Query 364651 CAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCC 364710 ||||||||| | ||| | | || | | | ||| | ||||| || || | Sbjct 302519 CAGTTTGATATGTGGGACCAAAAACCCTACGGCATGTGGGATTGGGACACCTTAAGAAAA 302578 Query 364711 AACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCT 364770 | | | ||||||||||| | | || ||| | | || || ||||| || || || Sbjct 302579 GATATCATGAAGCATGGTATTAGAAATTCCTTGACCATGGCACCAATGCCTACTGCATCC 302638 Query 364771 ACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCA 364830 || | || || | || | || || || |||||||| | || |||| | || || Sbjct 302639 ACATCCCAAATATTGGGTTATAATGAATGTTTCGAACCAGTCACTTCCAATATGTACTCC 302698 Query 364831 CGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCC 364890 || || || | ||||| ||||| | ||| || ||| ||| || | || | Sbjct 302699 CGTCGTGTCTTATCCGGTGAATTCCAGGTTGTGAATCCTTACTTACTGCGTGACTTGGTT 302758 Query 364891 GACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTG 364950 || || | |||| ||| | ||||| | ||| | || | ||||| || | Sbjct 302759 GATTTAGGTATTTGGGATGAGGGTATGAAACAGTATCTGATTACACAAAATGGCTCCATT 302818 Query 364951 CAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATT 365010 || | | ||| ||||| |||| ||||| | ||||| || || ||||||||| Sbjct 302819 CAAGGCTTACCAAATGTTCCACAAGAATTGAAGGACTTATACAAGACTGTTTGGGAAATT 302878 Query 365011 TC-CATGCGAACTCTCATTGATATGGCGGCCGATCG 365045 || || | ||| ||||| | ||||| |||||||| Sbjct 302879 TCACAAAAG-ACTATCATTAACATGGCAGCCGATCG 302913 >seq15 Length=1082832 Score = 122 bits (134), Expect = 2e-22 Identities = 339/515 (66%), Gaps = 34/515 (7%) Strand=Plus/Minus Query 111419 TGTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTC-G 111477 ||| || |||||||| || |||||||| ||||| | | ||||| || ||| || | Sbjct 462754 TGTTAAGATTTGGGACGGTAATGGATCTCGTGAATATTTAGATA-AGATGGGGTTCAAAG 462696 Query 111478 ACAACGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAG 111537 | | ||| ||| ||||| || || |||||||||||||||||| | || |||||||| Sbjct 462695 ATAGGAAAGTAGGAGATCTGGGGCCCGTTTACGGATTTCAATGGAGGCATTTTGGTGCTA 462636 Query 111538 ACTACAAAACCATGC-ACGACTCATATGATTCACAGGGAACTGATCAATTACAGAATGTC 111596 | ||||| | | ||| | ||| ||| | ||| || | ||||||||| | | || Sbjct 462635 AATACAAGA-CGTGCGATGACGACTATACTGGACAAGGTATTGATCAATTGAAACAGGTT 462577 Query 111597 ATTGATCAAATTAAGA-ACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCC 111655 || || || | |||| | | ||| || | | | || ||||||||||| |||||||| Sbjct 462576 ATACATAAACTAAAGACAAATCCCTAC-GATAGAAGAATCATTATGAGTGCCTGGAACCC 462518 Query 111656 AAATGCATTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATG---- 111711 | || || || |||||||| | || ||||| ||| || | | ||||| |||| Sbjct 462517 AGCTGATTTTGACAAAATGGCTTTGCCGCCATGCCATATTTTTTCACAGTTCTATGTCAG 462458 Query 111712 --TACACGACG--------GGAT-------------GCTTTCATGCCAAATGTATCAGCG 111748 | | | | | |||| ||||||||| | |||| || || Sbjct 462457 TTTCCCCAAAGAAGGAGAAGGATCCGGTAAGCCCCGCCTTTCATGCTTATTGTACCAACG 462398 Query 111749 ATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTGCAAGTTACGCACTACTTACTTG 111808 ||| |||||| || | || || || ||||| |||||| || || | | ||| | Sbjct 462397 TTCTTGTGATATGGGGTTGGGAGTACCATTTAACATTGCATCATATGCTTTGTTGACTAG 462338 Query 111809 CTTAATCGCTCATTTTACAAATCTCAAACCGGGTGAATTCATTCACGTTATCGGAGATGC 111868 | || ||| | || | | | || ||||| |||||||| | | || ||||| Sbjct 462337 AATGATTGCTAAAGTTGTCGACATGGAGCCAGGTGAGTTCATTCATACTTTGGGGGATGC 462278 Query 111869 GCATGTTTACACAAACCACATTGATGCACTTAAAA 111903 |||||||| | | ||||||||||||| ||| ||| Sbjct 462277 ACATGTTTATAAAGACCACATTGATGC-CTTGAAA 462244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303352848535190