Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001741295.1_202016-09- 21] 191 sequences; 12,045,918 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq12 109 4e-19 seq9 91.5 1e-13 >seq12 Length=1057121 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 ||||||||| || || || || || ||||| ||||||||||| || ||| | |||| Sbjct 69555 CAACACCAAGTGAAGAGTAGATTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTC 69614 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 || | ||||||||||||||| |||| || |||||||| | |||| || |||||||| Sbjct 69615 TTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTC 69674 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 ||| || || || | | | | || || | || ||||| | || || || Sbjct 69675 TTGAATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGT 69734 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||| || |||||||| || ||||| |||||||| Sbjct 69735 TTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 69767 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 ||||||||| || || || || || ||||| ||||||||||| || ||| | |||| Sbjct 69783 CAACACCAAGTGAAGAGTAGATTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTC 69842 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 || | ||||||||||||||| |||| || |||||||| | |||| || |||||||| Sbjct 69843 TTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTC 69902 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 ||| || || || | | | | || || | || ||||| | || || || Sbjct 69903 TTGAATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGT 69962 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||| || |||||||| || || ||||||||||| Sbjct 69963 TTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 69995 Score = 105 bits (116), Expect = 5e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 |||||||||||| | ||| |||||| ||||| || |||||||| || ||| | |||| Sbjct 68999 CAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTC 69058 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 |||| |||||||||||||| |||| || |||||||| | |||| || |||||||| Sbjct 69059 TTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTC 69118 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 ||| || || || | | || || || | || ||||| | || || || Sbjct 69119 TTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGT 69178 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || |||| || || |||||||| ||||| Sbjct 69179 CTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 69211 >seq9 Length=430781 Score = 91.5 bits (100), Expect = 1e-13 Identities = 130/183 (71%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 ||||||||||| ||||| ||||| | ||| | |||| ||||| |||||||| ||||| Sbjct 71162 TCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAG 71103 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 |||| || ||||| || | || | || |||||||| ||||||| || ||| Sbjct 71102 ATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTG 71043 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | || || || | || || |||| || || || || || |||||||| || ||| Sbjct 71042 TCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACA 70983 Query 48756 AAA 48758 ||| Sbjct 70982 AAA 70980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380936713248693