Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001741305.1_202016-09- 21] 177 sequences; 12,055,600 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq9 199 1e-45 seq5 197 4e-45 seq15 134 4e-26 >seq9 Length=430146 Score = 199 bits (220), Expect = 1e-45 Identities = 1072/1681 (64%), Gaps = 49/1681 (3%) Strand=Plus/Minus Query 363364 TATGAGAAGGATCTCGAGTATGATATTTTCGGATATAAGACGATGGAGAAATCCTACCTA 363423 || || | |||| || ||||| |||||||| ||||| ||||| || ||| | Sbjct 235413 TACGATAGGGATTTCCAGTATACGTATTTCGGATTCAAGACACTGGAGCGTTCGTACTTG 235354 Query 363424 TCTCGTATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATT 363483 | | || ||||| | | ||||| || |||||| || |||||||||| || | Sbjct 235353 CTAAGACTGAACGGTGAAGTGGCAGAACGTCCTCAGCATTTGGTAATGCGTGTGGCGCTA 235294 Query 363484 GGTATCCATTGCCCGGATGTTGATGCCGCGATTGAA-ACATATAAGCTTCTAAGTGCTCG 363542 ||||||||| | ||| | || | | | |||| || ||||| || | || | Sbjct 235293 GGTATCCATGGTAGCGATATCGAATCTGT-ACTGAAGACTTATAA--TTTGATGTCGTTA 235237 Query 363543 TG-TA-TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATG 363600 | || ||||| ||||| | ||||| | | ||| ||||| || | |||| || ||| Sbjct 235236 AGATACTTCACTCACGCTTCCCCAACTTTATTCAACGCTGGTACGCCACATCCTCAAATG 235177 Query 363601 TCTTCTTGCTTTCTTC-TAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACT 363659 ||||| || |||||| | |||||||| || || ||||| ||||| | ||| || | Sbjct 235176 TCTTCATG-TTTCTTAATTGCCATGAAGGATGACTCTATCGAAGGTATTTATGATACTTT 235118 Query 363660 TAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGT 363719 || | |||||| | |||||||| | |||||| || ||||| | ||| |||| | Sbjct 235117 GAAAGAATGTGCTATGATTTCCAAAACTGCAGGTGGTGTTGGTCTTCATATCAACAACAT 235058 Query 363720 TCGTGC-ACAGAACAGTTACATTCGC-GGCACAGGGGGATACT-CGAATGGGCTGGTTCC 363776 ||| | |||| ||| || ||| || || || |||| | || ||| || |||| Sbjct 235057 CCGTTCCACAGGTTC-TTATAT-CGCTGGTACCAACGG-TACTTCAAACGGGTTGATTCC 235001 Query 363777 CATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAA 363836 ||| ||||||| || | |||||||| | || || ||||||||||| ||| | Sbjct 235000 TATGATTCGTGTTTTCAATAATACTGCCCGTTATGTGGACCAGGGTGGTAACAAGAGACC 234941 Query 363837 AGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCT 363896 || || || || | | | ||||| ||||| ||||| || || ||| | || | Sbjct 234940 TGGTGCTTTCGCCCTTTTCTTGGAGCCATGGCATGCAGATATCTTCGACTTTGTCGATAT 234881 Query 363897 CCGGAAAAACACG-GGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGG 363955 | | |||||||| || || || ||| | |||||| | ||| ||||| ||| || ||| Sbjct 234880 CAG-AAAAACACATGGTAAGGAAGAAATTCGTGCAAGAGATTTGTTCCCTGCTCTATGGA 234822 Query 363956 TTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCAC 364015 | |||| | ||| ||||| || || | | | | | |||| | | |||| || | Sbjct 234821 TCCCTGATCTTTTCATGAAACGTGTTCAAGAGGATGGGCCTTGGACTTTATTTTCACC-C 234763 Query 364016 ACGAATGTCC-AGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAG 364074 | || || |||| | ||||| |||||||| || | || | ||||| Sbjct 234762 AGTGCTGCCCCAGGTTTAGATGATGTGTGGGGTGATGAATTTGAAGAACTATATACTCGT 234703 Query 364075 TATGAATCGGAGGGAAAGGC-TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCAT 364133 || ||| || ||| | | | |||| |||||| || || ||| | |||| |||||| Sbjct 234702 TACGAA----AGAGAAGGTCGTGGTAAAACAATTAAAGCCCAAAAGTTGTGGTATGCCAT 234647 Query 364134 CATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCG 364193 || | | |||| || ||||| ||||| | ||| | || || || | || ||| | Sbjct 234646 TTTGCAAGCACAGACAGAAACAGGTACACCTTTCATGGTTTATAAGGACGCATGTAACAG 234587 Query 364194 CAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTA 364252 ||| | ||||| ||| || | ||||| || || | | || ||||| || || Sbjct 234586 GAAGACAAACCAACAGAACTTAGGTACTAT-CAAATCATCTAATTTATGTTGTGAAATCG 234528 Query 364253 TTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGG 364312 | ||||| || | || || || ||||| || ||||| | || || || || || || | Sbjct 234527 TCGAATATTCCTCCCCGGATGAAACTGCAGTTTGTAATTTAGCTTCTATTGCCCTACCAG 234468 Query 364313 CGTTTGT---------AAAAGATGGTACTTTTGACCACCAGCATCTTTA-----TG-ACG 364357 | || || | ||||||||| || | | || | | || ||| Sbjct 234467 CATTCGTTGAGGTTTCAGAAGATGGTAAAACTGCAAGCTATAATTTCGAGAGATTGCACG 234408 Query 364358 TAAC--CTA---TCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCC 364412 | ||| |||| |||| ||| | ||| ||||||||| ||||| ||||| Sbjct 234407 AGATTGCTAAAGTCAT--TACTCACAACTTGAACAGAGTTATCGACCGTAATTACTATCC 234350 Query 364413 AATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGG 364472 | |||| || || ||| |||||| ||| | || |||| ||||||||| ||||| Sbjct 234349 AGTTCCCGAGGCTAGAAATTCAAATATGAAGCATAGACCTATTGCTCTTGGTGTCCAGGG 234290 Query 364473 CCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCT 364532 | | || || || ||||||| | | | ||||| ||| || |||| ||| Sbjct 234289 CTTGGCCGATACTTATATGATGTTGCGTCTACCCTTTGAATCGGAAGAAGCTCAAACTCT 234230 Query 364533 AAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGC 364592 ||| || | ||||| ||||| || || ||| | | || || ||||| ||||| Sbjct 234229 AAACAAACAAATCTTCGAAACTATTTACCATGCTACTCTTGAAGCCTCCTGTGAATTGGC 234170 Query 364593 A-AAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCC 364651 |||| |||| ||| || ||||||| ||| || || || ||| |||| | || | Sbjct 234169 CCAAAAAGAAGGTAAA-TATTCTACTTTTGAAGGTTCTCCAGCTTCTAAGGGTATTTTAC 234111 Query 364652 AGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCA 364711 | || ||| | ||||| | | |||| || | ||| | ||||| || || | Sbjct 234110 AATTCGATATGTGGAACGCTAAACCATTTGGCATGTGGGATTGGGAAACCTTAAGAAAGG 234051 Query 364712 ACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTA 364771 || || || ||||| | ||||| | || || || ||||| || || || | Sbjct 234050 ACATTGTTAAACATGGGTTAAGAAACTCTTTGACTATGGCACCAATGCCAACCGCCTCAA 233991 Query 364772 CTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCAC 364831 || | || || || || | || || || |||||||| | || || | || || | Sbjct 233990 CTTCCCAAATTCTTGGTTATAATGAATGTTTCGAACCAGTGACCTCAAACATGTACTCTC 233931 Query 364832 GCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCG 364891 | || || || || || ||||| | || |||||| || || | ||| | || Sbjct 233930 GTCGTGTCCTGTCTGGTGAATTCCAAGTTGTTAATCCATATTTACTACGTGATTTAGTCG 233871 Query 364892 ACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGC 364951 ||| || | |||| ||| || ||||| | ||| | || | ||||||||| | | Sbjct 233870 ACCTGGGTATTTGGGATGATAGTATGAAACAATATCTAATTACACAAAATGGTTCTATTC 233811 Query 364952 AGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTT 365011 | | | ||| | ||| |||| ||||| | ||||||||||| |||||||| | Sbjct 233810 AAGGCTTACCAAATGTGCCACAAGAATTGAAGGAACTATACAAAACCGTCTGGGAAATCT 233751 Query 365012 C 365012 | Sbjct 233750 C 233750 >seq5 Length=556907 Score = 197 bits (218), Expect = 4e-45 Identities = 698/1076 (65%), Gaps = 57/1076 (5%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 || || |||||| | ||||| ||| |||||| || |||| || || || ||||| ||| Sbjct 291583 TTTACTCACGCCTCTCCAACGTTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCT 291642 Query 363607 TGCTTTCTTC-TAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAA 363665 || |||||| | |||||||| || || |||||||| || | ||||| | ||| | Sbjct 291643 TG-TTTCTTGGTTGCCATGAAGGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGA 291701 Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC 363725 |||||| | |||||||| | ||| || || |||||| || ||||| || ||||| | Sbjct 291702 ATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTACATATCCATAACATTCGTTC 291761 Query 363726 ACAGAACAG----TTACATTCGCGGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATG 363780 | || | ||||||| || ||| || |||| | || || | |||| ||| Sbjct 291762 A----ACTGGTTCTTACATTGCTGGTACAAACGG-TACTTCTAACGGTTTAATTCCTATG 291816 Query 363781 CTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGG--AGGAAAGCGCAAAG 363838 ||||||| || | || || || | || || ||||||||||| | |||| | | Sbjct 291817 ATTCGTGTTTTCAATAACACCGCCCGTTATGTTGACCAGGGTGGTAATAAAAGACC--TG 291874 Query 363839 GGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCC 363898 | |||||||| | || || || || ||||| ||||| ||||| ||| |||| | Sbjct 291875 GTGCGTTTGCCCTTTACCTGGAACCATGGCATGCTGATATCTTTGATTTTATTGATATTA 291934 Query 363899 GGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTT 363958 |||| ||| || ||||||||| | |||||| | ||| ||||| ||| || ||| || Sbjct 291935 GGAAGAACCACGGTAAAGAGGAAATTCGTGCAAGAGATTTGTTCCCTGCTCTATGGATTC 291994 Query 363959 CTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACG 364018 |||| | ||| |||||||| || || | | | || ||| || | || | ||| Sbjct 291995 CTGATCTTTTCATGAAGCGTGTCGAAGAAAATGGGACCTGGACATTATTCTCTCCAACAT 292054 Query 364019 AATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATG 364078 | ||| ||| | |||| | |||||||| | || |||||||| || | Sbjct 292055 CAGCTCCTGGTTTAAGCGATTGTTACGGTGACGAGTTTGAGGCTCTATATACCCGCTACG 292114 Query 364079 AATCGGAGGGAAAGGC-TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATG 364137 | || ||| | | | ||||||| || || || || |||||| | |||| || Sbjct 292115 A----GAAAGAAGGTCGTGGTAAGACTATCAAAGCCCAAAAATTATGGTATTCCATTTTG 292170 Query 364138 GATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAG 364197 || | || | ||| || || ||||| | | | ||||| ||| | || ||| | || Sbjct 292171 GAAGCTCAAACTGAAACTGGTACACCTTTCGTTGTTTACAAGGATGCTTGTAACAGAAAA 292230 Query 364198 TCCAACCAGCAGCACCTTGGT----ACAATTCAGCAGAGCAACCTATGTACCGAGATTAT 364253 || || || | || | ||| ||| ||| || ||| |||| || ||| | Sbjct 292231 TCTAATCAAAAAAACTTAGGTGTCATCAAGTCATCA----AACTTATGCTGTGAAATTGT 292286 Query 364254 TGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGC 364313 ||||||| | ||||| || || ||||| || |||||| | || || | || | || || Sbjct 292287 TGAATACTCAGCTCCAGATGAAACTGCTGTTTGTAACTTGGCTTCCGTTGCCTTACCAGC 292346 Query 364314 GT---TTGTAA------AAGATGGT---ACTTTTGACCACCAGCATCTT-----TATGAC 364356 | ||| || | |||||| |||| |||| || ||| || || Sbjct 292347 ATTCATTGAAACTTCTGAGGATGGTAAGACTT----CCACATACAACTTCAAAAAATTAC 292402 Query 364357 GTAACCTATC-----ATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATC 364411 | | | || || |||| | ||| | ||| || || || ||||| || | Sbjct 292403 ATGAAATTTCTAAAGTTGTTACTCGTAATTTAAACAGAGTCATTGATCGTAATTACTACC 292462 Query 364412 CAATTCCTGAAGCCGAG-CGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAG 364470 | || |||| |||| || |||||| | ||| | || |||| | | ||||| || Sbjct 292463 CTGTTGAAGAAG-CGAGAAAATCCAATATGAGACATAGACCAATTGCTTTGGGTGTTCAA 292521 Query 364471 GGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTT 364530 || ||||||||| ||| ||| || | || |||||||||| || || ||| | Sbjct 292522 GGTCTCGCTGACACTTTCATGCTGTTACGTTTGCCATTTGATTCTGAGGAAGCCCGTTTG 292581 Query 364531 CTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGA 364586 ||||||| | ||||||||||| || ||| |||| | ||| ||||| ||||| Sbjct 292582 CTAAATATCCAAATCTTTGAAACTATTTATCATGCCTCCATGGAAGCTTCTTGTGA 292637 >seq15 Length=1087853 Score = 134 bits (148), Expect = 4e-26 Identities = 342/515 (66%), Gaps = 34/515 (7%) Strand=Plus/Minus Query 111419 TGTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTC-G 111477 ||| || |||||||| || |||||||| ||||| | | ||||| || ||| || | Sbjct 468477 TGTTAAGATTTGGGACGGTAATGGATCTCGTGAATATTTAGATA-AGATGGGGTTCAAAG 468419 Query 111478 ACAACGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAG 111537 | | ||| ||| ||||| || || ||||| |||||||||||| | || |||||||| Sbjct 468418 ATAGGAAAGTAGGAGATCTGGGGCCCGTTTATGGATTTCAATGGAGGCATTTTGGTGCTA 468359 Query 111538 ACTACAAAACCATGC-ACGACTCATATGATTCACAGGGAACTGATCAATTACAGAATGTC 111596 | ||||| || ||| | ||| ||| | ||| || | ||||||||| | | || Sbjct 468358 AATACAAGACG-TGCGATGACGACTATACTGGACAAGGTATTGATCAATTGAAACAGGTT 468300 Query 111597 ATTGATCAAATTAAGAACAA-CCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCC 111655 ||| || || |||||| || ||| || | | | || ||||||||||| |||||||| Sbjct 468299 ATTCATAAACTTAAGACAAATCCCTACGA-TAGAAGAATCATTATGAGTGCCTGGAACCC 468241 Query 111656 AAATGCATTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATG---- 111711 | || || || |||||||| | |||||||| ||| || | | ||||| |||| Sbjct 468240 AGCTGATTTTGACAAAATGGCTTTGCCACCATGCCATATTTTTTCACAGTTCTATGTCAG 468181 Query 111712 --TACACGACG--------GGAT-------------GCTTTCATGCCAAATGTATCAGCG 111748 | | | | | |||| ||||||||| | |||| || || Sbjct 468180 TTTCCCCAAAGAAGGAGAAGGATCCGGTAAGCCCCGCCTTTCATGCTTATTGTACCAACG 468121 Query 111749 ATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTGCAAGTTACGCACTACTTACTTG 111808 ||| |||||| || | || || |||||||| |||||| || || | | ||| | Sbjct 468120 TTCTTGTGATATGGGGTTGGGAGTACCGTTTAACATTGCATCATATGCTTTGTTGACTAG 468061 Query 111809 CTTAATCGCTCATTTTACAAATCTCAAACCGGGTGAATTCATTCACGTTATCGGAGATGC 111868 | || ||| | || | | | || ||||| |||||||| | | || ||||| Sbjct 468060 AATGATTGCTAAAGTTGTCGACATGGAGCCAGGTGAGTTCATTCATACTTTGGGGGATGC 468001 Query 111869 GCATGTTTACACAAACCACATTGATGCACTTAAAA 111903 |||||||| | | ||||||||||||| ||| ||| Sbjct 468000 ACATGTTTATAAAGACCACATTGATGC-CTTGAAA 467967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303350644238414