Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001741305.1_202016-09- 21] 177 sequences; 12,055,600 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq12 116 2e-21 seq95 100 2e-16 >seq12 Length=901379 Score = 116 bits (128), Expect = 2e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | | |||||||||||| | || ||| || |||||||||||||| || Sbjct 59061 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 59120 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || |||| ||||||| ||||| ||||||||||| || || | ||||| || || || Sbjct 59121 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGA 59180 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | || ||||||||| ||| ||| |||| ||| | ||| ||||| || || Sbjct 59181 ATACCTTCCTTGTCT-TGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAAC 59239 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | |||||| || || || |||| ||||| || ||||| ||||| Sbjct 59240 CTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 59287 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | | ||||||||| || ||||| |||||||| ||||| || || || Sbjct 59289 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 59348 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | |||| ||||||| || || ||||||||||| || || | |||||| || || || Sbjct 59349 AAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGG 59408 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCAC 34658 | || |||||||| ||| ||| | |||||| || || ||||| | || || Sbjct 59409 ATACCTTCCTTGTCCTGGAT-TTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAAC 59467 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | || || ||||||||||| || || || ||||| |||||||| Sbjct 59468 CTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 59515 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| || | | ||| | ||| | ||| |||||| |||||||| ||||| || Sbjct 59517 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 59576 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || |||| ||||||| || || ||||||||||| || || | ||||| || || || Sbjct 59577 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 59636 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | || ||||||||| ||| ||| | |||||| | || || || || || Sbjct 59637 ATACCTTCCTTGTCT-TGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAAC 59695 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| ||||| ||||||||||| || || || || ||||||||||| Sbjct 59696 TTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 59743 Score = 100 bits (110), Expect = 2e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 || |||||| |||||||||||| || || || || || |||| | ||||| ||||| Sbjct 58629 TGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGC 58688 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 ||||||||||| || || | || ||||| || || | || ||||||||| ||| ||| Sbjct 58689 TTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCT-TGAATTTT 58747 Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 | |||||| | ||| ||||| || || || | |||||| || ||||| || Sbjct 58748 CGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGT 58807 Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706 | || || |||||||| ||||| Sbjct 58808 CAGTGTCTTGACAAAAATTTGCAT 58831 >seq95 Length=102599 Score = 100 bits (110), Expect = 2e-16 Identities = 163/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | | ||| ||||| || ||||| |||||||| ||||| || || || Sbjct 8847 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 8788 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | |||| | ||||| | ||| ||||| ||||| || || | |||||||| || || Sbjct 8787 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 8728 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658 | || ||||||||| |||||| | || || | ||| ||||| || || Sbjct 8727 ATACCTTCCTTGTCTTGGATCTTG-GACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 8669 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710 ||||| ||| || || ||||||||||| || || || ||||| ||||| ||| Sbjct 8668 TTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTTG 8617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314728921069241