Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001741305.1_202016-09-
21] 177 sequences; 12,055,600 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq95 174 4e-38
seq11 161 2e-34
seq9 159 8e-34
seq12 147 5e-30
seq2 91.5 4e-13
>seq95
Length=102599
Score = 174 bits (192), Expect = 4e-38
Identities = 170/219 (78%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| ||| | ||| ||||| ||||| ||||||| ||||| |||| ||||||||| ||
Sbjct 8836 TCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACC 8777
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||| | ||||| ||||| ||||| | || ||||||||| || ||||||||||||||
Sbjct 8776 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTT 8717
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||||||||| ||| ||| || || ||||| || | ||| || || | || ||
Sbjct 8716 GTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAAT 8657
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| || || ||||| || | ||| | |||||| ||
Sbjct 8656 AGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 8618
>seq11
Length=645040
Score = 161 bits (178), Expect = 2e-34
Identities = 160/207 (77%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| ||| | || | ||||||||||||||||| ||||| || | | |||||| ||
Sbjct 617697 TCTCAAGACCAAATGTAAAGTGGATTCTTTTTGGATGTTGTAGTCAGATAGAGTTCTACC 617756
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||| | ||||| ||||| ||||| | || ||||||||| || || |||||||||||
Sbjct 617757 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 617816
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||||||||| ||| ||| || |||||||| || | ||| || || || |||||
Sbjct 617817 GTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 617876
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAA 225704
||||| || |||||||| || | |||
Sbjct 617877 GGTCTTACCAGTCAAAGTCTTAACGAA 617903
>seq9
Length=430146
Score = 159 bits (176), Expect = 8e-34
Identities = 156/201 (78%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| ||| | ||| | ||||||||||||||| | ||||| || | ||| ||||| ||
Sbjct 69891 TCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACC 69832
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||| | ||||| ||||| ||||| | || ||||||||| || || |||||||||||
Sbjct 69831 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 69772
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||| |||||| ||| ||| || || ||||| || | ||| || || || |||||
Sbjct 69771 GTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 69712
Query 225678 CGTCTTGCCCGTCAAAGTTTT 225698
||||| || |||||||| ||
Sbjct 69711 GGTCTTACCAGTCAAAGTCTT 69691
>seq12
Length=901379
Score = 147 bits (162), Expect = 5e-30
Identities = 153/201 (76%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| || | ||| ||||| ||||| ||||||| ||||| || | ||| ||||| ||
Sbjct 59300 TCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACC 59359
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||||||||||| || || ||||| | | ||||| || || || |||||||||||
Sbjct 59360 GTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTT 59419
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
||| ||||| || ||| || ||||| ||||| |||| ||| || ||||| |||||
Sbjct 59420 GTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGAT 59479
Query 225678 CGTCTTGCCCGTCAAAGTTTT 225698
|| || || |||||||| ||
Sbjct 59480 GGTTTTACCGGTCAAAGTCTT 59500
Score = 145 bits (160), Expect = 2e-29
Identities = 161/215 (75%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 225499 CTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCA 225558
|||| ||||||||| |||||||| || ||||| | |||||| || | || ||||| |||
Sbjct 58617 CTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCA 58676
Query 225559 TCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTG 225618
|||||||| ||||| || || || || | || ||| ||||| || |||||||||||||||
Sbjct 58677 TCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTG 58736
Query 225619 TCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATC 225678
||||| || || ||| || || || ||||| || | ||| || |||| || ||
Sbjct 58737 TCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATA 58796
Query 225679 GTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || |||| || || | || | ||||||
Sbjct 58797 GTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 58831
Score = 132 bits (146), Expect = 1e-25
Identities = 159/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| || | ||| ||||| ||||| ||||||| ||||| || | ||| ||||| ||
Sbjct 58844 TCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACC 58903
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||||||| ||||| ||||| || || | || ||||| || || || |||||||| ||
Sbjct 58904 ATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTT 58963
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
||||| ||||| || || || || ||||| || | ||| || |||| || ||
Sbjct 58964 ATCTTGAATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTAT 59023
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || || | |||||| | ||| | ||||||
Sbjct 59024 AGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 59059
Score = 132 bits (146), Expect = 1e-25
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555
|| || || ||||| || | ||||| || || || | |||||||| | || |||||
Sbjct 59526 AGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTA 59585
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
|| |||||||||||||| || || ||||| | || |||||| || || || |||||||||
Sbjct 59586 CCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCC 59645
Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675
|||||||| || || ||| || |||||||| || || | ||| || || || ||
Sbjct 59646 TTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTT 59705
Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || || || |||||||| || | ||| | |||||
Sbjct 59706 ATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 59743
Score = 107 bits (118), Expect = 5e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576
|| || ||||| || | || ||||| | || ||||| || ||||| || ||||| ||
Sbjct 59091 GTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCG 59150
Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636
|| || || | || |||||| || || |||||||||||||||||||| || || ||
Sbjct 59151 GCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGAATTTTACTTTTG 59210
Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696
|| || || ||||| || | ||| || |||| || || ||||| || || | ||||
Sbjct 59211 ACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTT 59270
Query 225697 TTTATGAACACTTGCAT 225713
|| | ||| | ||||||
Sbjct 59271 TTGACGAAAATTTGCAT 59287
>seq2
Length=797351
Score = 91.5 bits (100), Expect = 4e-13
Identities = 80/100 (80%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529
||| ||||||||||| ||||| || |||||||| || || |||||||| || ||||||||
Sbjct 30157 GAAAATTTGACCATCGGTAATGGAAATAACATTGGTTGGAATATAAGCGGAGACATCACC 30098
Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCA 4569
|||| ||||| | |||||| || || |||| || |||
Sbjct 30097 ACCTTGGGTTTCAATAACAGGCAAAGCAGTTAAAGAACCA 30058
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192528495562838
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |