Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001741405.1_202016-09-
21] 126 sequences; 11,932,271 total letters
Query= NC_019945.1
Length=132978
Score E
Sequences producing significant alignments: (Bits) Value
seq12 131 1e-25
seq9 102 7e-17
seq11 89.7 4e-13
seq37 87.8 2e-12
>seq12
Length=1035024
Score = 131 bits (144), Expect = 1e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610
|| |||||||| || || || || ||||| ||||| || |||||| ||| ||| ||
Sbjct 483461 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 483520
Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670
|| || || | | | || ||||| || ||| ||||| || || | || ||
Sbjct 483521 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 483580
Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730
||||| ||| | |||||||| || || |||||||||||| || |||| || |||| ||
Sbjct 483581 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTAC 483640
Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780
||||| ||||| ||||||||||| ||| |||| || ||||| |||| ||
Sbjct 483641 AACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 483690
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
|||||||| ||||| || ||| | || ||||| || || ||| || ||| ||||
Sbjct 54516 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 54457
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || | | | | | ||| ||||| ||||| || || | || |||||||
Sbjct 54456 GACACTATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 54397
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
|| ||| | || ||||| || || ||| ||||||| || ||| || | |||||||||
Sbjct 54396 CAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAAC 54337
Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
||||| ||||| ||||| |||| |||| || ||||| |||| || ||
Sbjct 54336 ATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGGTAT 54287
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
|||||||| || || ||||| |||| || || || || ||| || ||| ||||
Sbjct 54288 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 54229
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || | | | | |||| ||||| || ||||| || | || ||||||
Sbjct 54228 GACACTATTGACAACGTCAAAAGTAAAATTCAAGATAAAGAAGGTATCCCTCCGGATCAA 54169
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
|||||| | || ||||| || || ||| | |||||| || ||| || | || || |||
Sbjct 54168 CAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAAC 54109
Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
|| ||||| ||||||||||| ||| |||| || ||||| |||| || ||
Sbjct 54108 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGGTAT 54059
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
||||| || ||||| || || || || ||||||||||| || || ||| | ||
Sbjct 54993 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 54934
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| ||| | | | | ||| |||||| ||||| || || | || |||||||
Sbjct 54933 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 54874
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
||||| | |||||||| || || || | ||||| || ||| || | || || |||
Sbjct 54873 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAAC 54814
Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
|| ||||| ||||||||||| ||| |||| || ||||| |||| || ||
Sbjct 54813 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGGTAT 54764
Score = 87.8 bits (96), Expect = 2e-12
Identities = 89/116 (77%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 28668 GATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGAT 28727
|||||||||||| | || ||||| || || ||| | |||||| || ||| || | ||
Sbjct 53925 GATCAACAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGAC 53866
Query 28728 TATAACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
|| ||||| ||||| ||||||||||| ||| |||| || ||||| |||| || ||
Sbjct 53865 TACAACATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGGTAT 53810
>seq9
Length=441831
Score = 102 bits (112), Expect = 7e-17
Identities = 157/224 (70%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 28563 TTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCAGAGACGGTG 28622
||||| || || || || ||||| ||||| || ||| ||| |||| || || |
Sbjct 68780 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 68839
Query 28623 GCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTT 28682
| | || ||||| ||| || ||||| || || | || || ||||| ||| |
Sbjct 68840 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 68899
Query 28683 ATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAACATTCAAAAA 28742
|||||||| || || ||||||||||| || ||| || | || || ||||||||||||
Sbjct 68900 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAA 68959
Query 28743 GAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGATAAT 28786
||||| ||| ||||| | || || ||||| |||| || || ||
Sbjct 68960 GAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGCGGTATCAT 69003
>seq11
Length=655939
Score = 89.7 bits (98), Expect = 4e-13
Identities = 154/224 (69%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 28563 TTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCAGAGACGGTG 28622
|| || || || || || ||||| ||||| || ||| ||| |||| || || |
Sbjct 620757 TTCGTTAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATT 620698
Query 28623 GCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTT 28682
| | || ||||| || ||| ||||| || || | || || ||||| ||| |
Sbjct 620697 GACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 620638
Query 28683 ATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAACATTCAAAAA 28742
|||||||| || || ||||||||||| || |||| | | || || ||||| |||||
Sbjct 620637 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAAG 620578
Query 28743 GAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGATAAT 28786
||||| ||| | || |||| || |||||| |||| || || ||
Sbjct 620577 GAATCCACTTTACATTTGGTCTTGAGATTAAGAGGTGGTATCAT 620534
>seq37
Length=338
Score = 87.8 bits (96), Expect = 2e-12
Identities = 89/116 (77%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 28668 GATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGAT 28727
|||||||||||| | || ||||| || || ||| | |||||| || ||| || | ||
Sbjct 58 GATCAACAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGAC 117
Query 28728 TATAACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
|| ||||| ||||| ||||||||||| ||| |||| || ||||| |||| || ||
Sbjct 118 TACAACATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGGTAT 173
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425404146737754
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |