Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001741405.1_202016-09-
21] 126 sequences; 11,932,271 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq12 188 1e-42
seq37 131 3e-25
seq11 114 2e-20
>seq12
Length=1035024
Score = 188 bits (208), Expect = 1e-42
Identities = 184/237 (78%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| |||||||||||||||| | |||| || | |||| || || || ||
Sbjct 54052 AATTTGCATACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTT 54111
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
||||| || || |||||| ||| |||| ||| || || |||||||| |||||||||||
Sbjct 54112 GTAGTCAGACAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTG 54171
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
||| ||||| || |||||||||||||| ||||| |||| | || |||||| |||||
Sbjct 54172 ATCCGGAGGGATACCTTCTTTATCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGA 54231
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||| ||||| ||||| |||||||| || |||||||| ||||| || || ||||||||
Sbjct 54232 AGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 54288
Score = 185 bits (204), Expect = 2e-41
Identities = 183/237 (77%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| |||||||||||||||| | |||| |||||| |||| |||||| ||| ||
Sbjct 54280 AATTTGCATACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTT 54339
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
||| || || | ||||||| || || | ||| || ||||||||||| ||||| |||||
Sbjct 54340 ATAATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTG 54399
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
||| ||||| || ||||| || ||||| ||||| | || | || ||||| || ||
Sbjct 54400 ATCTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATAGTGTCAGA 54459
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||| ||||| ||||| |||||||| |||||||| || || || ||||| ||||||||
Sbjct 54460 AGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 54516
Score = 156 bits (172), Expect = 8e-33
Identities = 172/229 (75%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 193132 TACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGG 193191
||||||| ||||| | | || || || | || | ||| || |||||| ||||| |
Sbjct 53583 TACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCG 53642
Query 193192 ATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAG 193251
| | ||||||| ||| |||| ||| || ||||||||||| ||||| || || || ||||
Sbjct 53643 ACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAG 53702
Query 193252 GTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAA 193311
| || ||||| || ||||| ||||| | || | || |||||| || ||||| ||||
Sbjct 53703 GAATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAA 53762
Query 193312 CTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
| ||||| |||||||| |||||||| || || || ||||| ||||||||
Sbjct 53763 CCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 53811
Score = 147 bits (162), Expect = 4e-30
Identities = 185/258 (72%), Gaps = 21/258 (8%)
Strand=Plus/Plus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| |||||||||||||||| | |||| || | |||| || || || ||
Sbjct 53803 AATTTGCATACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTT 53862
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
||||| || || |||||| ||| |||| ||| || || |||||||| |||||||||||
Sbjct 53863 GTAGTCAGACAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTG 53922
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATT-TAAA---------- 193292
||| ||||| || |||||||||||||| ||||| |||| | || | ||
Sbjct 53923 ATCCGGAGGGATACCTTCTTTATCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGA 53982
Query 193293 ----------ATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGT 193342
||||| || ||||| ||||| ||||| |||||||| |||||||| || ||
Sbjct 53983 NNNNNNNNNNATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGT 54042
Query 193343 TTTTACAAATATTTGCAT 193360
|| ||||| ||||||||
Sbjct 54043 CTTGACAAAAATTTGCAT 54060
Score = 147 bits (162), Expect = 4e-30
Identities = 171/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192
|||||||||||||| | |||| || | |||| || || || || ||||||||
Sbjct 483691 ACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGA 483632
Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252
|| |||||| ||| || ||||| || || ||||| || ||||| ||||| ||||| ||
Sbjct 483631 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 483572
Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312
|| ||||| || ||||| || |||| || | ||| |||||| || ||||| |||||
Sbjct 483571 AATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 483512
Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
||| || || ||||| ||||| |||| || || || || |||||||| ||
Sbjct 483511 TTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 483461
Score = 138 bits (152), Expect = 2e-27
Identities = 178/245 (73%), Gaps = 2/245 (1%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| | | || || ||||| || || | ||| || ||| || || ||
Sbjct 54992 ATACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCA 55051
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | ||||||| || |||| || || |||||||| || ||||| |||||||| |||
Sbjct 55052 GACAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGA 55111
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| || ||||| ||||| | || | || || ||||||||||| |||
Sbjct 55112 GGGATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCA 55171
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT--TTTATTAG 193368
||||| | ||||| |||||||| || | || || || || || ||||| | ||||||
Sbjct 55172 ACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATAATCTATTAG 55231
Query 193369 TAAAA 193373
| |||
Sbjct 55232 TTAAA 55236
Score = 131 bits (144), Expect = 3e-25
Identities = 128/165 (78%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 193196 CGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTAT 193255
||||||| || || | ||| || ||||||||||| ||||| |||||||| ||||| ||
Sbjct 54601 CGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAAT 54660
Query 193256 TCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTC 193315
||||| || ||||| ||||| | || | || ||||| || ||||| ||||| ||
Sbjct 54661 ACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATAGTGTCAGAAGATTCAACCTC 54720
Query 193316 TAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||| |||||||| |||||||| || || || ||||| ||||||||
Sbjct 54721 TAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 54765
Score = 125 bits (138), Expect = 1e-23
Identities = 170/237 (72%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| |||||||||||||||| | |||| || | |||| || || || ||
Sbjct 54757 AATTTGCATACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTT 54816
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
||||| || || |||||| || |||| || || |||||||| || || ||||||||
Sbjct 54817 GTAGTCAGACAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTG 54876
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
||| ||||| || ||||| || || || ||||| | || | || || || |||||
Sbjct 54877 ATCTGGAGGGATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGA 54936
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| ||||| |||| ||| || |||||||| || | || || ||||| || |||||
Sbjct 54937 GGATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 54993
>seq37
Length=338
Score = 131 bits (144), Expect = 3e-25
Identities = 128/165 (78%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 193196 CGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTAT 193255
||||||| || || | ||| || ||||||||||| ||||| |||||||| ||||| ||
Sbjct 336 CGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAAT 277
Query 193256 TCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTC 193315
||||| || ||||| ||||| | || | || ||||| || ||||| ||||| ||
Sbjct 276 ACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATAGTGTCAGAAGATTCAACCTC 217
Query 193316 TAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||| |||||||| |||||||| || || || ||||| ||||||||
Sbjct 216 TAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 172
Score = 127 bits (140), Expect = 4e-24
Identities = 136/180 (76%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| |||||||||||||||| | |||| || | |||| || || || ||
Sbjct 180 AATTTGCATACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTT 121
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
||||| || || |||||| ||| |||| ||| || || |||||||| |||||||||||
Sbjct 120 GTAGTCAGACAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTG 61
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
||| ||||| || |||||||||||||| ||||| |||| | || |||||| |||||
Sbjct 60 ATCCGGAGGGATACCTTCTTTATCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGA 1
>seq11
Length=655939
Score = 114 bits (126), Expect = 2e-20
Identities = 149/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| |||| | |||| ||| || || | || || || || |||||
Sbjct 620537 ATACCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCA 620596
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|||| |||||| || || ||||| || || ||||| || ||||| ||||| |||||
Sbjct 620597 GATAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGT 620656
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| || ||||| || |||| || | ||| ||| || || ||||| |||
Sbjct 620657 GGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCA 620716
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGT 193336
||||| | ||| || || ||||| ||
Sbjct 620717 ACTTCCAAAGTGATGGTCTTACCAGT 620742
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899652983044320
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