Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001741525.1_202016-09- 21] 284 sequences; 12,233,126 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq154 118 7e-22 seq12 118 7e-22 >seq154 Length=468 Score = 118 bits (130), Expect = 7e-22 Identities = 168/235 (71%), Gaps = 1/235 (0%) Strand=Plus/Minus Query 34744 ATCATTT-CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTAT 34802 |||| || || ||||||||||||| ||| ||||||| ||| |||||| ||||| || | Sbjct 357 ATCAGTTACCACCCCTCAACCTCAAGACGAGGTGAAGAGTGGACTCCTTTTGAATATTGT 298 Query 34803 AGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGT 34862 ||||||| || | | |||| || ||||| || ||||| || |||| || |||||||| Sbjct 297 AGTCCGACAGCGTTCTACCATCTTCTAGTTGTTTACCGGCAAAAATCAATCTTTGCTGGT 238 Query 34863 CTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGG 34922 || | || | || |||||||| | |||||| || ||| | || | ||| | Sbjct 237 CTGGAGGAATACCTTCCTTGTCTTGAATTTTTGACTTAACGTTGTCAATAGTGTCAGAAG 178 Query 34923 CCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || | |||||| ||||| || || || || || || || || ||||| Sbjct 177 ATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 123 >seq12 Length=1050644 Score = 118 bits (130), Expect = 7e-22 Identities = 168/235 (71%), Gaps = 1/235 (0%) Strand=Plus/Plus Query 34744 ATCATTT-CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTAT 34802 |||| || || ||||||||||||| ||| ||||||| ||| |||||| ||||| || | Sbjct 55914 ATCAGTTACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGT 55973 Query 34803 AGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGT 34862 ||||||| || | | |||| || |||||||| ||||| || |||| || |||||||| Sbjct 55974 AGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGT 56033 Query 34863 CTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGG 34922 || | || | || |||||||| | ||||| || ||| | || | ||| | Sbjct 56034 CTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAG 56093 Query 34923 CCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || | |||||| ||||| || || || || || || || || ||||| Sbjct 56094 ATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 56148 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/232 (69%), Gaps = 10/232 (4%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || || ||||| |||| |||| || | || ||| |||||||||||||| || || Sbjct 56378 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 56437 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || | | | || ||||||||||| ||||| ||||||| || ||| || ||| | || Sbjct 56438 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 56497 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACG-----GATGCTATCGATTCATTGGCCT 34925 | || |||||||| | ||||| || ||| |||| ||||| || | Sbjct 56498 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGAT-----T 56552 Query 34926 CGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || || | |||||| ||||| || || || ||||| ||||| || ||||| Sbjct 56553 CAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 56604 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || || ||||| |||| |||| ||||| || ||||| || |||||||| || || Sbjct 56150 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTATAATCAGAC 56209 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || | | | || ||||||||||| ||||| || |||| || ||| || ||| | || Sbjct 56210 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGA 56269 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || |||||||| | ||||| ||||||| | || | || | || || Sbjct 56270 ATACCTTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACC 56329 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | |||||| ||||| || || || || || || || || ||||| Sbjct 56330 TCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 56376 Score = 82.4 bits (90), Expect = 5e-11 Identities = 159/235 (68%), Gaps = 10/235 (4%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || || || | ||| || || || || | |||| ||||||||||||||| || || || Sbjct 56834 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 56893 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || | | | || || || ||||| ||||| ||||||| || ||| || ||| | || Sbjct 56894 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 56953 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACG-----GATGCTATCGATTCATTGGCCT 34925 | || |||||||| | ||||| || ||| |||| ||||| || | Sbjct 56954 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGAT-----T 57008 Query 34926 CGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 | || || | |||||||| || || || | ||||| || || |||||||| || Sbjct 57009 CAACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATAAT 57063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325691672695796