Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001741535.1_202016-09- 21] 295 sequences; 12,024,663 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq15 134 3e-26 seq10 120 6e-22 >seq15 Length=1035313 Score = 134 bits (148), Expect = 3e-26 Identities = 229/327 (70%), Gaps = 4/327 (1%) Strand=Plus/Minus Query 35295 ATACAGACGCCAAAGAATTGGCCAAG-AAGAAGATACACATCTGGAACGCTAATGGGTCG 35353 |||||||||| || |||| | || ||| | || | || ||| ||| |||||| || Sbjct 457290 ATACAGACGCTAACCTATTGTCTGAGCAAGGTGTTA-AGATTTGGGACGGTAATGGATCT 457232 Query 35354 CGGGAATTTTTGGACAGTAGAGGGTTATACGATAGAGCAGAGGGAGATTTGGGACCCGTA 35413 || |||| ||| || | | ||||| | ||||| || |||||| |||| ||||| Sbjct 457231 CGTGAATATTTAGATAAGATGGGGTTCAAAGATAGGAAAGTAGGAGATCTGGGGCCCGTT 457172 Query 35414 TACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGATACCTGTTCTTCCGATTATACT 35473 || ||||| |||||| | |||||||||||| |||| | || || | ||| |||||| Sbjct 457171 TATGGATTTCAATGGAGGCATTTTGGTGCTAAATACAAGACGTGCGATGACGACTATACT 457112 Query 35474 GGAAAGGGTATTGATCAATTG-GCCAATATACTAAAGACCCTGAGAGAAAATCCAGATGA 35532 ||| | ||||||||||||||| || || | | | | | ||| |||||| | || Sbjct 457111 GGACAAGGTATTGATCAATTGAAACAGGTTATTCATAAACTTAAGA-CAAATCCCTACGA 457053 Query 35533 TAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACCTTATGGCTCTTCCTCC 35592 |||||| || ||||||| || ||||| || ||| || || |||||| | || || Sbjct 457052 TAGAAGAATCATTATGAGTGCCTGGAACCCAGCTGATTTTGACAAAATGGCTTTGCCACC 456993 Query 35593 ATGCCACATGACTGCTCAATTTTATGT 35619 |||||| || | | || || ||||| Sbjct 456992 ATGCCATATTTTTTCACAGTTCTATGT 456966 >seq10 Length=747394 Score = 120 bits (132), Expect = 6e-22 Identities = 296/444 (67%), Gaps = 15/444 (3%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 ||||||||||| | ||||||| |||| || ||| | || || |||||||||||| Sbjct 392281 GTTGCCTTTGCCTCCATTGAAGGTGTCTTTTTCTCCGGTTCCTTTGCCTCCATTTTCTGG 392340 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 | || || || ||||| |||| ||| | |||| ||||| || || || | ||| ||| Sbjct 392341 TTGAAAAAGAGAGGTATGATGCCCGGTTTAACCTTTTCCAACGAATTGATCTGTAGAGAC 392400 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097 |||||| | || ||||||||||||| || |||| | |||| || | | Sbjct 392401 GAAGGTTTGCACACCGACTTTGCATGCTTGTTGTTCGCCCA----TTTGAAGA---ACAA 392453 Query 102098 TCAAGAGAAAG-GATTCTTG---AAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATT 102153 | ||| || || ||| |||||||||| || || || |||||||||| || Sbjct 392454 ACCAGACCCAGCCATCGTTGAAAAAATTGTCACCGAGGCTGTGGAAATTGAACAAAGATA 392513 Query 102154 TCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTA 102213 || | || | || ||| || | || |||||| | || |||| ||| || Sbjct 392514 CTTCTTGGACGCCTTACCAGTTGCTTTGCTAGGTATGAACGCTGACTTAATGAACCAATA 392573 Query 102214 CATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGG--ACTAGAAAAGCACTATAAT 102271 | |||| || || || || | ||| ||||| | | || || ||||| |||| || Sbjct 392574 CGTTGAGTTCGTCGCCGACAGACTGTTGGTCGCTTTCGGTAACAAGAAA--TACTACAAG 392631 Query 102272 GTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTT 102331 || ||||||||| |||||||| || || ||| | | |||||| ||||| || Sbjct 392632 GTCGAAAACCCCTTCGATTTCATGGAAAACATCTCCTTGGCCGGTAAGACTAACTTCTTC 392691 Query 102332 GAAAAGAGAGTCGCCGAGTATCAA 102355 ||||||||||| | || || ||| Sbjct 392692 GAAAAGAGAGTTTCTGACTACCAA 392715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989580259681725