Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001741535.1_202016-09- 21] 295 sequences; 12,024,663 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq12 179 7e-40 seq11 165 2e-35 seq9 161 2e-34 >seq12 Length=1050694 Score = 179 bits (198), Expect = 7e-40 Identities = 172/218 (79%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313 |||| |||| |||||||| || || ||||| ||||| || || || || || ||||||| Sbjct 58643 CAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTA 58702 Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373 |||||| ||||| || || | ||||||||| || || || || |||||||||||||||| Sbjct 58703 GCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAA 58762 Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433 | || | ||| ||| |||||||| || | ||||| |||||||| || |||||||| | Sbjct 58763 TTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTAC 58822 Query 68434 CCGTGAGGGTCTTGACGAATATCTGCATTATGCTATTA 68471 | || | ||||||||||| |||||||| || |||||| Sbjct 58823 CGGTCAAAGTCTTGACGAAAATCTGCATAAT-CTATTA 58859 Score = 178 bits (196), Expect = 2e-39 Identities = 167/213 (78%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| ||||||||||| || || || ||||||||||| || ||||| | || || ||||| Sbjct 490973 CAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATC 490914 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || ||||| || || || || | |||||||||||| |||||||| ||||||||||| Sbjct 490913 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTC 490854 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| ||||| | |||||| || || ||||| | ||||| ||||||| ||| || || Sbjct 490853 TTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATAGT 490794 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | ||||||||||| || ||||| Sbjct 490793 CTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 490761 Score = 150 bits (166), Expect = 3e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| ||||| || | ||| |||||||| || ||||||||||| || || || || || || Sbjct 58182 CAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTC 58241 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| | ||||| ||||| || || | ||||||||| || || ||||| ||||||||||| Sbjct 58242 TTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTC 58301 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 |||||| || |||||| || || ||||| | ||||| || || | ||| || || Sbjct 58302 TTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGT 58361 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || || || |||||||| || ||||| Sbjct 58362 CTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 58394 Score = 145 bits (160), Expect = 1e-29 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| || || || || ||||||||||| || || || | || || || || Sbjct 58410 CAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTC 58469 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||||| |||||| ||||| || || | || ||||| || || || || ||||||||||| Sbjct 58470 TTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTC 58529 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 || || || | ||| ||| ||||| ||||| | ||||| || || || |||||||| Sbjct 58530 CTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGT 58589 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||| || || | ||||| || || |||||||| Sbjct 58590 TTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 58622 Score = 120 bits (132), Expect = 6e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 68258 GTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTG 68317 ||| || || || || ||||||||||| || || || | || || |||||||||| || Sbjct 57963 GTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCTAGTTG 58022 Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377 ||| || || || || | ||| ||||| || || || || ||||| || ||||||||||| Sbjct 58023 CTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGAATCTT 58082 Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437 |||||| || || ||||| | ||||| || || | ||| || || || || || Sbjct 58083 ACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGT 58142 Query 68438 GAGGGTCTTGACGAATATCTGCAT 68461 || || |||||||| || ||||| Sbjct 58143 TAGAGTTTTGACGAAAATTTGCAT 58166 Score = 111 bits (122), Expect = 3e-19 Identities = 102/129 (79%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| || | ||| || |||||||| ||||| || || || || || || || || ||||| Sbjct 57727 CAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATC 57786 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||||| ||||| ||||| || || | |||||| ||||| || ||||| ||||||||||| Sbjct 57787 TTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTC 57846 Query 68369 TTGAATCTT 68377 |||||| || Sbjct 57847 TTGAATTTT 57855 >seq11 Length=649014 Score = 165 bits (182), Expect = 2e-35 Identities = 159/204 (78%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| ||||| |||| ||||| || ||||||||||| || || || || || || || || Sbjct 621719 CAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACCGTC 621778 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || ||||| || || || || | |||||||||||| ||||| || ||||||||||| Sbjct 621779 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTC 621838 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| ||||| | |||||| || |||||||| | ||||| |||||||| |||||||| Sbjct 621839 TTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATGGT 621898 Query 68429 TTTTCCCGTGAGGGTCTTGACGAA 68452 || || || | ||||| ||||| Sbjct 621899 CTTACCAGTCAAAGTCTTAACGAA 621922 >seq9 Length=439182 Score = 161 bits (178), Expect = 2e-34 Identities = 158/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| || ||||| | ||||| |||||||| ||||| || || || | || || || || Sbjct 71789 CAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACCGTC 71730 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || ||||| || || || || | |||||||||||| ||||| || ||||||||||| Sbjct 71729 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTC 71670 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||||||||||| |||||| || || ||||| | ||||| |||||||| |||||||| Sbjct 71669 TTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGT 71610 Query 68429 TTTTCCCGTGAGGGTCTTGACGAA 68452 || || || | |||||||| || Sbjct 71609 CTTACCAGTCAAAGTCTTGACAAA 71586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921619001517400