Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001741685.1_202016-09-
21] 478 sequences; 12,507,844 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq92 134 1e-26
seq12 100 2e-16
>seq92
Length=792
Score = 134 bits (148), Expect = 1e-26
Identities = 168/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| || | |||||| |||||||| || | ||| |||||||| | ||||| || |||
Sbjct 330 CCACCTCTCAGTCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 389
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
|| || | | || || | ||| || || ||||||||||||| ||||||||| | ||
Sbjct 390 AAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGG 449
Query 43003 ACACCTTCTTTTTCGCTGATC-AACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGAC 43061
| ||||||||| || ||| ||| |||||| || ||| |||||| || || ||
Sbjct 450 ATACCTTCTTTATCTTGAATCTTACT-TTTGACGTTGTCAATAGTGTCGGAAGATTCAAC 508
Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|||| |||||||| || || ||||||||||| || |||||||||||
Sbjct 509 CTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 556
Score = 123 bits (136), Expect = 2e-23
Identities = 167/229 (73%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| || | || ||| ||||||||||| | || ||| || || | || ||||| |||
Sbjct 558 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 617
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
| || | |||| |||| ||| || |||||||||||||||| |||||||| | ||
Sbjct 618 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGA 677
Query 43003 ACACCTTCTTTTTCGCTGA--TCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGA 43060
| |||||| || || ||| | ||| |||||| || ||| |||||| || || |
Sbjct 678 ATACCTTCCTTGTC-TTGAATTTTACT-TTTGACGTTGTCAATAGTGTCGGAAGATTCAA 735
Query 43061 CGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
| |||| |||||||| || || ||||||||||| || |||||||||||
Sbjct 736 CCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 784
>seq12
Length=1054888
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| || | || ||| || ||||| || | ||| |||||||| | ||||| ||||||
Sbjct 491600 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 491541
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
|| || | | || |||||||| || || ||||| ||||||| ||||| || | ||
Sbjct 491540 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 491481
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| |||||| || || |||| ||||| || ||| ||||| || || ||
Sbjct 491480 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 491421
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTT 43112
|| | || ||||| || ||||||| ||| || || ||||||||||| ||
Sbjct 491420 TCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 491371
Score = 84.2 bits (92), Expect = 2e-11
Identities = 141/202 (70%), Gaps = 8/202 (4%)
Strand=Plus/Plus
Query 42912 AGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCC 42971
|||| ||||||||| | |||||| || |||| || | | || || | ||| || ||
Sbjct 59989 AGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACC 60048
Query 42972 GGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGA----TCAACT 43027
|||||||||||||| || || || | || | |||||| || || ||| || ||
Sbjct 60049 GGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTC-TTGAATTTTCGAC- 60106
Query 43028 CTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTA 43087
|| || || ||| ||||| || || || |||| |||||||| || || || |
Sbjct 60107 --TTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCA 60164
Query 43088 GAGTTTTCACAAAAATTTGCAT 43109
| || || ||||||||||||||
Sbjct 60165 GTGTCTTGACAAAAATTTGCAT 60186
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381367378283724
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |