Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001741695.1_202016-09- 21] 341 sequences; 12,361,416 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq12 87.8 2e-12 seq103 86.0 5e-12 seq9 84.2 2e-11 >seq12 Length=1023821 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||| || || | |||| || | ||| || |||||||| ||||| ||||| | | Sbjct 471217 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 471158 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| | || |||| || || || ||| | || | ||| || ||||| || Sbjct 471157 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 471098 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| |||||| || || | | | | ||| ||| | || | Sbjct 471097 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 471038 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 |||| |||||| ||||| |||||||| || ||||| || |||||||| ||| Sbjct 471037 TCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTTG 470987 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||| || || | ||||| |||||| || ||||| || ||||||||||| || | | Sbjct 64782 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 64841 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || ||| |||| ||||| || || || ||| |||| | ||| || || || || Sbjct 64842 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGA 64901 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| || || ||| || | | | | ||| || | || Sbjct 64902 ATACCTTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACC 64961 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| || ||||| || |||| |||||||| || |||||||| Sbjct 64962 TCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 65008 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||| ||||| ||||| | ||| || ||||||||||| |||||||| || || | | Sbjct 65010 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 65069 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || ||| |||| || ||||| || || ||| | || | ||| || || || || Sbjct 65070 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 65129 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| || || || || | | ||| ||||| | || | Sbjct 65130 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACT 65189 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || ||||| || ||||| || || ||||| || || ||||| Sbjct 65190 TCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 65236 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||| ||||| ||||| | ||| || ||||||||||| |||||||| || || | | Sbjct 65259 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 65318 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || ||| |||| || ||||| || || ||| | || | ||| || || || || Sbjct 65319 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 65378 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| || || || || | | ||| ||||| | || | Sbjct 65379 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACT 65438 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || ||||| || ||||| || || ||||| || || ||||| Sbjct 65439 TCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 65485 >seq103 Length=743 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||| ||||| ||||| | ||| || ||||||||||| |||||||| || || | | Sbjct 511 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 570 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || ||| |||| || ||||| || || ||| | || | ||| || || || || Sbjct 571 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 630 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| || || || || | | ||| ||||| | || | Sbjct 631 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACT 690 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || ||||| || ||||| || || ||||| || || ||||| Sbjct 691 TCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 737 >seq9 Length=448507 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 20973 TGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGT 21032 ||||||||||| || ||||||||||| ||||| | || |||| |||| |||| || Sbjct 75967 TGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACCGTCTTCCAATTGC 75908 Query 21033 TTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTT 21092 || || ||| | || | ||| || ||||| || | ||||||||||| |||||| Sbjct 75907 TTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGAATCTTT 75848 Query 21093 TGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTT 21152 || || | | | | ||| ||| | || ||||| || |||||||| || || Sbjct 75847 GACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAGTC 75788 Query 21153 AACGTTTTGACAAA 21166 || || |||||||| Sbjct 75787 AAAGTCTTGACAAA 75774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422257445117156