Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001741725.1_202016-09- 21] 92 sequences; 12,058,477 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq12 127 2e-24 seq11 84.2 2e-11 seq5 82.4 7e-11 >seq12 Length=1037656 Score = 127 bits (140), Expect = 2e-24 Identities = 188/264 (71%), Gaps = 7/264 (3%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | || || || |||||||||||||| || || ||| | ||| || | Sbjct 493485 CTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCA 493426 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||||||| || || || | ||||||| ||| ||||| || ||||| ||||| || Sbjct 493425 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTG 493366 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 ||||| || || |||| || | ||||| ||||| || ||||| || |||| Sbjct 493365 TCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATA 493306 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC---GC---GCGACCAATTTAATAA 45359 || || ||||||| ||| || || |||||||||||| || || | || |||| || Sbjct 493305 GTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTTGGCTTGTCGGCAAAATTAA-AA 493247 Query 45360 TTTAACTCTTATTTTCTTACTAAG 45383 |||||| | |||||||| ||| Sbjct 493246 ATTAACTGCTTCTTTCTTACCAAG 493223 Score = 125 bits (138), Expect = 6e-24 Identities = 159/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 |||||||| | ||||| ||| || || || || || |||||||| | ||| || Sbjct 63927 CTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCG 63986 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||| ||| || || || | ||||||| ||| || || || ||||| ||||| || Sbjct 63987 TCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTG 64046 Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 ||||||||||| ||||| || | || | ||||||||||| || || || || || | Sbjct 64047 TCTTGAATTTTACTTTTGA-CGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTAT 64105 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || ||||||||||| || ||||||||||| Sbjct 64106 AGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 64141 Score = 118 bits (130), Expect = 1e-21 Identities = 158/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 45125 CCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA 45184 |||||| || || || || || || |||||||| ||||| || || | ||| || Sbjct 63698 CCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACC 63757 Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244 ||| || | ||| || || || | ||||||| ||||||||| || ||||| ||||| || Sbjct 63758 ATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTT 63817 Query 45245 ATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAA 45303 ||||||| |||| | | | || | || | ||||| ||||| || || || || || | Sbjct 63818 GTCTTGAA-TTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTA 63876 Query 45304 CCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || ||||||||||| || ||||||||||| Sbjct 63877 TAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 63913 Score = 86.0 bits (94), Expect = 6e-12 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182 ||||| | ||| ||||| | || || ||||| || || || ||||| | ||| || Sbjct 64380 AGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTA 64439 Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242 || || | || || || || | ||||||| ||| || || || || || ||||| Sbjct 64440 CCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCC 64499 Query 45243 TTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGT 45301 || ||||||| |||| | | | || | || | ||| |||||||| || ||||| | || Sbjct 64500 TTGTCTTGAA-TTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGT 64558 Query 45302 AACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | ||||| ||||| | ||| || || ||||| ||||| Sbjct 64559 TATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 64597 >seq11 Length=646798 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | ||| | || |||||||||||||| || || || | ||| || Sbjct 619398 CTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACCG 619457 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||||||| || || || | ||||||| ||| ||||| || || || ||||| || Sbjct 619458 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTG 619517 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 ||||| || || |||| || | |||||| ||||| || ||||| | ||| | Sbjct 619518 TCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATG 619577 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAA 45331 || || || || | ||| || || || Sbjct 619578 GTCTTACCAGTCAAAGTCTTAACGAA 619603 >seq5 Length=552421 Score = 82.4 bits (90), Expect = 7e-11 Identities = 200/303 (66%), Gaps = 0/303 (0%) Strand=Plus/Plus Query 122841 TACAAATATTTTGGATACAAAACGTTAGAAAACGGATATTTGaaaaaaaTCGAGGAAAAG 122900 |||| |||||||| | ||||| || ||| ||||| || |||| | | | Sbjct 293805 TACAGTTATTTTGGTTTTAAAACTTTGGAACGTTCTTATTTACTAAGAATCAACGGTCAA 293864 Query 122901 GTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGCGAC 122960 || ||||||||| |||||| | | ||| | ||||| ||||| | ||||| | || Sbjct 293865 GTGGCCGAACGTCCACAACATTTAATTATGAGAGTCGCACTAGGCATCCACGGTAGAGAT 293924 Query 122961 ATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCGAGT 123020 ||||| || ||||| || | |||||||||| ||||| ||| || ||||| | Sbjct 293925 ATCGAGGCTGCTTTAGAAACGTATAACTTGATGTCTCTAAAATATTTTACTCACGCCTCT 293984 Query 123021 CCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTCACC 123080 || || |||||| ||||| || ||||| |||| || ||||| ||| | || Sbjct 293985 CCAACGTTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCTTGTTTCTTGGTTGCC 294044 Query 123081 TTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGATTTCC 123140 || || ||| ||| || || || || || ||| || || || ||||||||| Sbjct 294045 ATGAAGGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGAATGTGCTTTGATTTCC 294104 Query 123141 AAA 123143 ||| Sbjct 294105 AAA 294107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452002680196320