Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001741805.1_202016-09- 21] 247 sequences; 11,958,749 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq12 98.7 9e-16 seq9 82.4 7e-11 >seq12 Length=1051125 Score = 98.7 bits (108), Expect = 9e-16 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 131920 ATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTG 131979 ||||| | | ||||| || ||||||||||| || || || | ||||| ||||| Sbjct 62724 ATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTG 62783 Query 131980 TTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTT 132039 ||||||| | |||| | | |||||||||||||| || ||||| || || |||||| Sbjct 62784 CTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAATTTT 62843 Query 132040 TTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGT 132099 || | | || | ||||||| | || ||||| | || | |||||||| || Sbjct 62844 CGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCGGT 62903 Query 132100 CAGAGTTTTTATGAAAATCTGCATGACTTATTAG 132133 || ||| || | |||||||||||| | |||||| Sbjct 62904 CAAAGTCTTGACGAAAATCTGCATAATCTATTAG 62937 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964 ||| | ||| ||||| || | | || || ||||| ||||||||||| || ||| | Sbjct 62025 CAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCT 62084 Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024 |||||| || || ||||| | | | || | | ||||||||| ||||| || ||||| Sbjct 62085 ACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTC 62144 Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084 |||||| ||| || ||| | | || | ||| |||| | || || || | || Sbjct 62145 TTTATCTTGAATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGT 62204 Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 | || || || || |||||||| | |||||| ||||| Sbjct 62205 TATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 62243 >seq9 Length=429379 Score = 82.4 bits (90), Expect = 7e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 147163 TGCGCCAATTCACAGCTTGCCTCGAGCGCTCCATAGTATATGGTTTCGGCGATTTGTTTG 147222 || |||||||||||| || || || | ||| ||| || |||||| |||||||||| Sbjct 233377 TGGGCCAATTCACAGGAGGCTTCAAGAGTAGCATGGTAAATAGTTTCGAAGATTTGTTTG 233436 Query 147223 TTTAGGACGGTCGCTTCTTCGCTCTCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCC 147282 ||||| |||||||| || | || | ||||| | || ||| | ||||||| Sbjct 233437 TTTAGAGTTTGAGCTTCTTCCGATTCAAAGGGTAGACGCAACATCATAAAAGTATCGGCC 233496 Query 147283 AAACCCTGGATACCGACGCCGATAGGTCGATGCTT 147317 |||||||||| ||| | | ||||||| |||||| Sbjct 233497 AAACCCTGGACACCAAGAGCAATAGGTCTATGCTT 233531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476609728462920