Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001741815.1_202016-09-
21] 195 sequences; 12,135,891 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq12 156 1e-32
seq9 111 4e-19
>seq12
Length=1054343
Score = 156 bits (172), Expect = 1e-32
Identities = 168/220 (76%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| |||||||| ||||| || || || ||||| ||||| ||| || |||
Sbjct 61520 CAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCCGAC 61461
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || ||||||||| |||||||| || |||||||| ||||||||||| || ||
Sbjct 61460 ACTATTGACAACGTCAAAAGTAAGATTCAAGATAAAGAAGGTATCCCTCCGGATCAACAG 61401
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
|| | || || || || || || || |||||||| || || |||| | || || ||| |
Sbjct 61400 AGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAAC-CTTGTCTGACTACAACAT 61342
Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|||||| ||||| || || || | || |||||| | |||
Sbjct 61341 CCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGA 61302
Score = 152 bits (168), Expect = 1e-31
Identities = 165/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| |||||||| ||||| || || || ||||| ||||| ||| || |||
Sbjct 61748 CAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCCGAC 61689
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || ||||||||| || ||||| ||||| ||||| || ||||| || || |||
Sbjct 61688 ACTATTGACAACGTCAAAAGTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAACAA 61629
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | || || ||||| || || || ||||| || || || || | ||||||||| |
Sbjct 61628 AGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAACATT 61569
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| ||||| || || ||||| | || |||||| | |||
Sbjct 61568 CAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGA 61530
Score = 125 bits (138), Expect = 2e-23
Identities = 159/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || ||| | || || || || || ||||| || || ||| || |||
Sbjct 492974 CAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCTTCTGAC 493033
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| ||||| || ||||| ||||| || || || ||||| |||
Sbjct 493034 ACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAACAA 493093
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| || || || || | |||||||| || ||| | |||| || ||| ||
Sbjct 493094 AGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAACATC 493153
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||| ||||| || || || | || |||||| | |||
Sbjct 493154 CAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGA 493192
>seq9
Length=436484
Score = 111 bits (122), Expect = 4e-19
Identities = 155/215 (72%), Gaps = 2/215 (1%)
Strand=Plus/Plus
Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988
||| || || ||| | || || || || ||||| | || || ||| || ||||| ||
Sbjct 71661 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 71720
Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048
|| || ||||| ||||||||| ||||| ||||| ||||| || ||||| ||| || |
Sbjct 71721 TGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 71780
Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCC-GATTATAACGTCCAAA 178107
||||| || || || || | ||||| || || || |||| | || || ||| | ||||
Sbjct 71781 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAAC-CTTGTCTGACTACAACATTCAAA 71839
Query 178108 AAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||||| || |||| | || |||||| | |||
Sbjct 71840 AAGAATCCACTTTGCACTTAGTCTTGAGATTGAGA 71874
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203728192552830
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |