Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001750485.1_202016-09- 30] 201 sequences; 11,553,758 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq109 127 2e-24 >seq109 Length=255806 Score = 127 bits (140), Expect = 2e-24 Identities = 532/831 (64%), Gaps = 23/831 (3%) Strand=Plus/Plus Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003 ||||| || ||| |||||||||||| ||||| || || || || | || || || ||| Sbjct 22617 TTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTGGTCTTACCGGCCAAGGAGATGTTT 22676 Query 16004 TCCATAAAATCAAAAGGATTTTTTGAAC-AATAGTATTTATCGCATCCCAATTCCAACAA 16062 ||||| ||||| |||| |||| || | |||||||| | | || || | | ||| Sbjct 22677 TCCATGAAATC-GAAGGGGTTTTCGACCTTGTAGTATTTCTTGTTACCGAAAGCAACCAA 22735 Query 16063 TAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAA 16122 | ||| || || || || || | || || |||||||||||| |||||| |||| || Sbjct 22736 CAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAATCAGCGTTCATACCTAGCAA 22795 Query 16123 TTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTAT 16182 ||| || | || || || | ||| ||| || | || || || ||| || Sbjct 22796 AGCAACTGGTAAGGCGTCCAAGAAGTATCTTTGTTCAATTTCCACAGCCTCGGTGACAAT 22855 Query 16183 ATCTCTTACTACACTATTTAACGGAGGGTTTAAT----AAGTGTTTAAACATTATACAAG 16238 | || | ||| | | | ||||| | || || |||| | || | Sbjct 22856 ---TTTTTCAACAATGGCT-GGGTCTGGTTTGTTCTTCAAATGGGCGAACAACAAGCATG 22911 Query 16239 CAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTG 16298 |||| || ||||| |||||||| |||| || || ||||| ||||| || | ||| | Sbjct 22912 CAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAAAAGGTTAAACCGG 22971 Query 16299 GCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATAC 16358 |||| | |||| ||||| | ||| || || | |||||| ||||| || || || | || Sbjct 22972 GCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCGGAGAAAAAGACAC 23031 Query 16359 CTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttctatcc 16418 |||||| | |||||| ||||| | || ||||| || | || |||| Sbjct 23032 CTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCAGCGTCTTGAATCC 23091 Query 16419 attttttagcccaatttgctttttgtttAACACAGTTC----ATGTTCTCTATTGCATTA 16474 || || |||||| | || | | | || | ||| ||| | | || ||||| Sbjct 23092 ATCTTAAAGCCCATTCGGCCT----TCTCACCGATTTCTGGGATGGTGTGAATGGCATTG 23147 Query 16475 AATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATT 16534 || || | | ||||||| || || |||||||| || | || || || Sbjct 23148 AACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAAGTATCGATCAACAAGGAGTAAGTT 23207 Query 16535 TCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATT 16594 || || |||||||| || || || || ||||| || || | | || || | ||| Sbjct 23208 TCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCTTTGCCTCTGGAATT 23267 Query 16595 TGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCA 16654 || ||||| | | | || |||| | |||||||| ||||| || || || ||| || Sbjct 23268 TGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACCGTCAGAAGCGGCG 23327 Query 16655 AAAAACGCAAGTA-TGTGTTTAATAAAAtttttttCGTTATCTGAAAGT---TTTAACCA 16710 ||||| ||||| | | || ||| ||| | | ||||| || | | || ||| Sbjct 23328 AAAAAGGCAAGAACTCTG-GAAATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCCA 23386 Query 16711 GTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGC 16761 |||| | ||| || || ||||| | ||||| | ||||| |||||||| Sbjct 23387 GTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAAGAAGC 23437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462510837938600