Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001750485.1_202016-09-
30] 201 sequences; 11,553,758 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq109 134 3e-26
seq81 127 4e-24
>seq109
Length=255806
Score = 134 bits (148), Expect = 3e-26
Identities = 299/444 (67%), Gaps = 15/444 (3%)
Strand=Plus/Minus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
||||||||||| | ||||||| |||| || ||| | || || ||||||||||||
Sbjct 23053 GTTGCCTTTGCCTCCATTGAAGGTGTCTTTTTCTCCGGTTCCTTTGCCTCCATTTTCTGG 22994
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
| || || || ||||| |||| ||| | |||| ||||| || || || | ||| |||
Sbjct 22993 TTGAAAAAGAGAGGTATGATGCCCGGTTTAACCTTTTCCAACGAATTGATCTGTAGAGAC 22934
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097
|||||| | || ||||||||||||| || |||| | |||| || | |
Sbjct 22933 GAAGGTTTGCACACCGACTTTGCATGCTTGTTGTTCGCCCA----TTTGAAGA---ACAA 22881
Query 102098 TCAAGAGAAAG-GATTCTTG---AAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATT 102153
| ||| || ||| ||| |||||||||| || || || |||||||||| ||
Sbjct 22880 ACCAGACCCAGCCATTGTTGAAAAAATTGTCACCGAGGCTGTGGAAATTGAACAAAGATA 22821
Query 102154 TCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTA 102213
|| | || | || ||| || | || |||||| | || |||| ||| ||
Sbjct 22820 CTTCTTGGACGCCTTACCAGTTGCTTTGCTAGGTATGAACGCTGATTTAATGAACCAATA 22761
Query 102214 CATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGG--ACTAGAAAAGCACTATAAT 102271
| |||| || || || || | ||| ||||||| | || || ||||| |||| ||
Sbjct 22760 CGTTGAGTTCGTCGCCGACAGACTGTTGGTTGCTTTCGGTAACAAGAAA--TACTACAAG 22703
Query 102272 GTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTT 102331
|| ||||||||| |||||||| || || ||| | | |||||||||||| ||
Sbjct 22702 GTCGAAAACCCCTTCGATTTCATGGAAAACATCTCCTTGGCCGGTAAGACCAACTTCTTC 22643
Query 102332 GAAAAGAGAGTCGCCGAGTATCAA 102355
||||||||||| | || || |||
Sbjct 22642 GAAAAGAGAGTTTCTGACTACCAA 22619
>seq81
Length=539133
Score = 127 bits (140), Expect = 4e-24
Identities = 229/335 (68%), Gaps = 20/335 (6%)
Strand=Plus/Minus
Query 35295 ATACAGACGCCAAAGAATTGGCCAAG-AAGAAGATACACATCTGGAACGCTAATGGGTCG 35353
|||||||||| || |||| | || ||| | || | || ||| ||| |||||| ||
Sbjct 431386 ATACAGACGCTAACCTATTGTCTGAGCAAGGTGTTA-AGATTTGGGACGGTAATGGATCT 431328
Query 35354 CGGGAATTTTTGGACAGTAGAGGGTTATACGATAGAGCAGAGGGAGATTTGGGACCCGTA 35413
|| |||| ||| || | | || || | ||||| || |||||| |||| |||||
Sbjct 431327 CGTGAATATTTAGATAAGATGGGATTCAAAGATAGGAAAGTAGGAGATCTGGGGCCCGTT 431268
Query 35414 TACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGATACCTGTTCTTCCGATTATACT 35473
|| ||||| |||||| | |||||||||||| |||| | || || | ||| ||||||
Sbjct 431267 TATGGATTTCAATGGAGGCATTTTGGTGCTAAATACAAGACGTGCGATGACGACTATACT 431208
Query 35474 GGAAAGGGTATTGATCAATTG---------GCCAATATACTAAAGACCCTGAGAGAAAAT 35524
||| | ||||||||||||||| | ||| ||||||||| ||||
Sbjct 431207 GGACAAGGTATTGATCAATTGAAACAGGTTATCCATAAACTAAAGAC---------AAAT 431157
Query 35525 CCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACCTTATGGCT 35584
|| | |||||||| || ||||||| || ||||| || ||| || || ||||||
Sbjct 431156 CCCTACGATAGAAGAATCATTATGAGTGCCTGGAACCCAGCTGATTTTGACAAAATGGCT 431097
Query 35585 CTTCCTCCATGCCACATGACTGCTCAATTTTATGT 35619
| || |||||||| || | | || || |||||
Sbjct 431096 TTGCCGCCATGCCATATTTTTTCACAGTTCTATGT 431062
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989581451511955
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |