Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001750485.1_202016-09- 30] 201 sequences; 11,553,758 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq109 152 5e-32 >seq109 Length=255806 Score = 152 bits (168), Expect = 5e-32 Identities = 545/842 (65%), Gaps = 19/842 (2%) Strand=Plus/Plus Query 13351 TTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTA 13410 || || ||||| || ||||| || ||| |||||| ||||| || ||||| || ||| Sbjct 22599 TTGGACATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTGGTCTTA 22658 Query 13411 CCTTCCAGTGATATATTTTCCATAAAATCGAATGGATTTGTTGACATAA-ACACTTTATC 13469 || ||| || || |||||||| |||||||| || ||| | ||| | | ||| | Sbjct 22659 CCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTT-TCGACCTTGTAGTATTTCTT 22717 Query 13470 ACAACCTAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATC 13529 ||| | | | || | ||| || || | ||||||| ||||| ||||||||| Sbjct 22718 GTTACCGAAAGCAACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAATC 22777 Query 13530 ACAATTCATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAAT---TCTTT-TTCTA 13585 | |||||||||| | || || | | || || | ||||| ||| | Sbjct 22778 AGCGTTCATACCTAGCAAAGCAACTGGTA----AGGCGTCCAAGAAGTATCTTTGTTCAA 22833 Query 13586 TAGACACAGCCTCGTTTATAATAATCTTAATAATGTCATTAGAAGGAGGATATTTTAGAT 13645 | |||||||||| | | ||| | | || |||| | || | || | || Sbjct 22834 TTTCCACAGCCTCGGTGACAATTTTTTCAACAATGGCTGGGTCTGGTTTGTTCTTCAAAT 22893 Query 13646 GTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGT 13705 | || | || || ||||| || || | || || ||||||| || | ||||| Sbjct 22894 GGGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGT 22953 Query 13706 TTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATG 13765 | ||||| ||||| || ||||||| |||| ||||| ||||| || || | || || | Sbjct 22954 TGGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGG 23013 Query 13766 ATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATG 13825 | ||||| || || | || |||| | ||||| || | ||||| ||| |||||| | | Sbjct 23014 AACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGG 23073 Query 13826 CTTTTTTGT-TTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATT 13884 | | || |||| |||||| || ||||||||| | || | || || Sbjct 23074 CGTCAGCGTCTTGA-ATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGGATG 23132 Query 13885 GTTTCGATTGCATTGAATAAATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAA 13942 || | || |||||||| || ||| | ||||||| | ||||| |||| ||||| | Sbjct 23133 GTGTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGA--TGTAAGTATCGA 23190 Query 13943 TAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAAC 14002 | | ||| || |||||||||| || ||||| || || || ||||| || |||| Sbjct 23191 TCAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAAC 23250 Query 14003 ATCTAGCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAA 14062 | || |||| ||| || || | | | || |||| |||||||||||||||||| Sbjct 23251 TCTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAA 23310 Query 14063 TACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGT 14122 |||| ||| ||| || ||||| || | | | ||| || || ||| | | || Sbjct 23311 TACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTCTCGT 23370 Query 14123 TGAGT---TTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAA 14179 | | | || ||||| || | ||||||||| | ||| | ||| ||| | ||||| | Sbjct 23371 TCATTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGA 23430 Query 14180 AA 14181 || Sbjct 23431 AA 23432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478587597545640