Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001750485.1_202016-09-
30] 201 sequences; 11,553,758 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq115 136 5e-27
seq92 114 2e-20
seq81 107 2e-18
>seq115
Length=176623
Score = 136 bits (150), Expect = 5e-27
Identities = 389/589 (66%), Gaps = 28/589 (5%)
Strand=Plus/Plus
Query 164398 AATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGACGA 164457
|| |||||||| |||| || ||||| | ||| ||| ||| || ||||||||| ||
Sbjct 77513 AAGTTTGAAGATTTGGGTGTCGGTGGTTTGGATAAAGAGTTTACTAAAATTTTCAGAAGA 77572
Query 164458 GCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAACATATA 164517
|| ||||| | || ||||| | | ||| ||||| | || | ||| |
Sbjct 77573 GCGTTTGCAAGTCGAATCTTTCCTCCTTCAGTTATAGAAAAACTGGGTATTTCTCATGTT 77632
Query 164518 AAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGCATT 164577
||||| | |||| | || ||||| ||| ||||| || ||||| || || |||
Sbjct 77633 AAAGGTTTGCTATTGTACGGTCCTCCAGGTACTGGTAAGACCTTAATTGCAAGAAAGATT 77692
Query 164578 GCT-CAAGCTTTTAAATCGC----GACCCGTTAAAATTGTTAATGGTCCTGAATTATTGA 164632
| | ||| | | ||| || || || ||||| || |||||||| ||| | ||||
Sbjct 77693 GGTACAA--TGCTGAAT-GCTAAAGAGCCC--AAAATCGTCAATGGTCCAGAAATTTTGA 77747
Query 164633 ACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGAAG 164692
||| || || ||| ||||||| || || | || || ||| |||| || |||| ||
Sbjct 77748 GCAAGTACGTTGGTTCTTCAGAAGAAAACATTCGTAATTTATTTAAGGATGCAGAAGCAG 77807
Query 164693 AACAAAAGAAAGC--AGGTTTAGCTAG-TAAATTACATGTTATTGTTTTTGATGAGATAG 164749
|| | | | || ||| | || | | |||||| ||||| |||| |||||| | |
Sbjct 77808 AATATAGG---GCCAAGGGTGAGGAATCTTCCTTACATATTATTATTTTCGATGAGCTGG 77864
Query 164750 ATGCTCTTTGCAAAAAACGTGGT------GATAATATTATTCATGATG----CAGTG--G 164797
|| || ||| ||| | | ||| | | || || | || | || || |
Sbjct 77865 ATTCTGTTTTCAAGCAGAGAGGTTCAAGAGGTGATGGTACTGGTGTAGGGGACAATGTAG 77924
Query 164798 TTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATTGTAG 164857
||||||| ||| | ||||||| |||||||| || || ||||||||||| || | |
Sbjct 77925 TTAATCAATTGTTAGCTAAAATGGATGGTGTTGATCAGTTGAATAATATTTTGGTTATTG 77984
Query 164858 GTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGAAT 164917
|||||||||| || |||||||| || | |||| | || || || ||| |||| |||
Sbjct 77985 GTATGACCAATCGTAAAGATTTAATAGACGGTGCTCTTTTGCGTCCAGGTAGATTTGAAG 78044
Query 164918 TGAAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTT 164966
| || | ||||| |||||||| || ||||| | || ||||||||
Sbjct 78045 TCCAAGTTGAAATTCATTTACCCGATGAAAAAGGAAGACTCCAAATTTT 78093
>seq92
Length=477498
Score = 114 bits (126), Expect = 2e-20
Identities = 123/163 (75%), Gaps = 0/163 (0%)
Strand=Plus/Plus
Query 19341 TAAGATCTTCTAAAATACCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAG 19400
||||| || | || || ||| |||| ||||| || ||||||||| | | |||||| |
Sbjct 447217 TAAGAACTACAAAGATTCCTCAAATTGGTGACAAATTTGCTTCTCGTCACGGTCAAAAGG 447276
Query 19401 GCACATGTGGTATGATTTATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGC 19460
| || |||||| | |||||| |||||||||||| ||||| ||| ||||| || |
Sbjct 447277 GTACTATTGGTATCACATATCGTAGAGAAGATATGCCATTTACCGCAGAAGGTATTGTTC 447336
Query 19461 CGGATCTTATTATTAACCCACATGCTTTTCCAAGTCGAATGAC 19503
| ||| | ||||||||||| |||||| ||||| ||| |||||
Sbjct 447337 CAGATTTGATTATTAACCCTCATGCTATTCCATCTCGTATGAC 447379
>seq81
Length=539133
Score = 107 bits (118), Expect = 2e-18
Identities = 405/632 (64%), Gaps = 49/632 (8%)
Strand=Plus/Plus
Query 6699 TGGATGAGGATTATAATCTAACAATTCAAAATCTTCAAATTTAAAATCACATAAAT-TAT 6757
||||||||||||||||||| | |||||| ||| || || |||||| | ||| | |
Sbjct 430728 TGGATGAGGATTATAATCTTCAATTTCAAAGTCTGTCAACTTGAAATCA--TCAATGTCT 430785
Query 6758 CAGACtttttttttAATATTACAACAGGTGAA-GGTTTT--ATTGATCGAGTTAATTGTT 6814
|| | ||||||| || | ||| ||| || ||| || || | |||||
Sbjct 430786 TTAACGTCCCTTTTAATCTTTAGTTTCGGGAATGGTCTTGGATT--TCTGGTGATTTGTT 430843
Query 6815 CTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAATAAATT 6874
|||| | || | || || ||| ||||| ||| ||||| || | |||||||| || |
Sbjct 430844 CTTTCAAGGCATCAATGTGGTCTTTATAAACATGTGCATCCCCCAAAGTATGAATGAACT 430903
Query 6875 CACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGAAGCTA 6934
||||||| | ||| || ||| ||| |||||| | || || || ||||| || || |
Sbjct 430904 CACCTGGCTCCATGTCGACAACTTTAGCAATCATTCTAGTCAACAAAGCATATGATGCAA 430963
Query 6935 CATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTGATAACATTGACAAG-ATAAA 6993
||||| ||||| || || |||||||| || | ||| || || ||| || ||
Sbjct 430964 TGTTAAATGGTACTCCCAACCCCATATCACAAGAACGTTGGTACAAT----AAGCATGAA 431019
Query 6994 A---------TATTG------------TCTATAG---------CATAAAATTGACACAAT 7023
| || | ||| | | |||| || || | ||
Sbjct 431020 AGGCGGGGCTTACCGGATCCTTCTCCTTCTTTGGGGAAACTGACATAGAACTGTGAAAAA 431079
Query 7024 ACATGACATGGAGGTAAAACAGCCTGATCTATATCAGATGGATTCCAAGCAGTCATTAAA 7083
| ||| ||||| || ||| | | || | ||||| ||| ||||| ||| |||| |
Sbjct 431080 ATATGGCATGGCGGCAAAGCCATTTTGTCAAAATCAGCTGGGTTCCAGGCACTCATAATG 431139
Query 7084 ATACGTCTATCATTTGGATTTGTTTTTAATTTTGTTATAATTATTTGTAATTGATCTATA 7143
|| | |||||| | |||||||| |||| ||| |||| || |||||||| |||
Sbjct 431140 ATTCTTCTATCGTAGGGATTTGTCTTTAGTTTATGGATAACCTGTTTCAATTGATCAATA 431199
Query 7144 CCCTGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCCATTGA 7203
|| || || ||| | || || | | || ||||| |||||||| |||||||||
Sbjct 431200 CCTTGTCCAGTATAGTCGTCATCGCACGTCTTGTATTTAGCACCAAAATGCCTCCATTGA 431259
Query 7204 AACCCATAAATAGGACCTAAATCACCTTCTTCACGATGATTAAATCCTAATCGATTTAAA 7263
|| ||||||| || || | ||| ||| ||| | || || ||||| | || ||||
Sbjct 431260 AATCCATAAACGGGCCCCAGATCTCCTACTTTCCTATCTTTGAATCCCATCTTATCTAAA 431319
Query 7264 TTAGATT---TTGATCCATAAGCATCCCAAAT 7292
| ||| ||||||| | | ||||||||
Sbjct 431320 T---ATTCACGAGATCCATTACCGTCCCAAAT 431348
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595870502871600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |