Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001750485.1_202016-09-
30] 201 sequences; 11,553,758 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq111 185 2e-41
seq55 147 4e-30
seq53 129 1e-24
seq50 111 3e-19
>seq111
Length=83080
Score = 185 bits (204), Expect = 2e-41
Identities = 183/237 (77%), Gaps = 0/237 (0%)
Strand=Plus/Minus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| |||||||||||||||| | |||| |||||| |||| |||||| ||| ||
Sbjct 31801 AATTTGCATACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTT 31742
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
||| || || | ||||||| || || | ||| || |||||||| || ||||| |||||
Sbjct 31741 ATAATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTG 31682
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
||| ||||| || ||||| || ||||| ||||| | || | || |||||| || ||
Sbjct 31681 ATCTGGAGGAATACCTTCCTTGTCTTGAATTTTTGACTTAACGTTGTCAATAGTGTCAGA 31622
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||| ||||| ||||| |||||||| |||||||| || || || ||||| ||||||||
Sbjct 31621 AGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 31565
Score = 185 bits (204), Expect = 2e-41
Identities = 183/237 (77%), Gaps = 0/237 (0%)
Strand=Plus/Minus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| ||||||||||||| || | |||| || | |||| || || || ||
Sbjct 32029 AATTTGCATACCACCTCTCAGTCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTT 31970
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
||||| || || |||||| ||| |||| ||| || || |||||||| |||||||||||
Sbjct 31969 GTAGTCAGACAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTG 31910
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
||| ||||| || |||||||||||||| ||||| |||| | || |||||| |||||
Sbjct 31909 ATCCGGAGGGATACCTTCTTTATCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGA 31850
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||| ||||| ||||| |||||||| || |||||||| ||||| || || ||||||||
Sbjct 31849 AGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 31793
Score = 136 bits (150), Expect = 7e-27
Identities = 182/252 (72%), Gaps = 2/252 (1%)
Strand=Plus/Minus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| |||||||||||||||| | |||| || | |||| || || || ||
Sbjct 31573 AATTTGCATACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTT 31514
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
|| || || | ||||||| || |||| || || |||||||| || ||||| |||||
Sbjct 31513 GTAATCAGACAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTG 31454
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
||| ||||| || ||||| || ||||| ||||| | || | || || ||||||||
Sbjct 31453 ATCTGGAGGGATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGA 31394
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT--T 193361
||| |||||||| | ||||| |||||||| || | || || || || || ||||| |
Sbjct 31393 AGATTCAACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATAAT 31334
Query 193362 TTATTAGTAAAA 193373
||||||| |||
Sbjct 31333 CTATTAGTTAAA 31322
>seq55
Length=132018
Score = 147 bits (162), Expect = 4e-30
Identities = 171/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192
|||||||||||||| | |||| || | |||| || || || || ||||||||
Sbjct 8695 ACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGA 8636
Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252
|| |||||| ||| || ||||| || || ||||| || ||||| ||||| ||||| ||
Sbjct 8635 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 8576
Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312
|| ||||| || ||||| || |||| || | ||| |||||| || ||||| |||||
Sbjct 8575 AATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 8516
Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
||| || || ||||| ||||| |||| || || || || |||||||| ||
Sbjct 8515 TTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 8465
>seq53
Length=182751
Score = 129 bits (142), Expect = 1e-24
Identities = 161/221 (73%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|||||||||||||||| | || | ||||| || | ||||| ||| || |||||
Sbjct 135845 ATACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCA 135904
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| || |||||| || || ||||| || || ||||| || ||||| ||||| |||||
Sbjct 135905 GACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGT 135964
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| || ||||| || || | || | ||| |||||| || ||||| |||
Sbjct 135965 GGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCA 136024
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAA 193351
||||| | ||| || || ||||| || | || || |||||
Sbjct 136025 ACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 136065
>seq50
Length=69059
Score = 111 bits (122), Expect = 3e-19
Identities = 148/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| |||| | |||| ||| || || | || || || || |||||
Sbjct 29407 ATACCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCA 29348
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|||| |||||| || || ||||| || || ||||| || ||||| ||||| |||||
Sbjct 29347 GATAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGT 29288
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| || ||||| || |||| || | ||| ||| || || || || |||
Sbjct 29287 GGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGATGATTCA 29228
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGT 193336
||||| | ||| || || ||||| ||
Sbjct 29227 ACTTCCAAAGTGATGGTCTTACCAGT 29202
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899652139618320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |