Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001750485.1_202016-09-
30] 201 sequences; 11,553,758 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq111 123 2e-23
seq55 93.3 3e-14
seq53 93.3 3e-14
>seq111
Length=83080
Score = 123 bits (136), Expect = 2e-23
Identities = 167/230 (73%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | |||||||| || ||||| || ||||| ||||||||||| ||
Sbjct 31564 ACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAATCAGA 31505
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || | |||| || | || || |||||||| ||||| | || |||||| | ||
Sbjct 31504 CAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGG 31445
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||| ||||| ||||||| | | ||| | ||| | ||| ||| ||||| |
Sbjct 31444 GATACCTTCCTTGTCTTGAATTTTC-GACTTAACGTTGTCGATGGTATCGGAAGATTCAA 31386
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | || || |||||||| || || || || || || |||||||||
Sbjct 31385 CTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATA 31336
Score = 120 bits (132), Expect = 2e-22
Identities = 166/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | ||||||||||| | || |||||| || ||||| ||||| ||
Sbjct 31792 ACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGA 31733
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || | |||| |||| ||| || |||||||| ||||| | || |||||| | ||
Sbjct 31732 CAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGG 31673
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||| ||||| |||||| || | ||| | ||| | ||||| ||||| |
Sbjct 31672 AATACCTTCCTTGTCTTGAATTTT-TGACTTAACGTTGTCAATAGTGTCAGAAGATTCAA 31614
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | || || || |||||||| | || || ||||| || ||||||
Sbjct 31613 CCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCATA 31564
Score = 102 bits (112), Expect = 5e-17
Identities = 162/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||||||||||| | |||||||| || ||||| || ||||| |||||||| || ||
Sbjct 32020 ACCACCTCTCAGTCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGA 31961
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| || | | || || | ||| || || ||||||||||| | ||| ||||| | ||
Sbjct 31960 CAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGG 31901
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||||||||| || |||||| ||| || | ||| | |||||| ||||| |
Sbjct 31900 GATACCTTCTTTATCTTGAATTTT-ACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAA 31842
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | || || || || ||||||| ||||| || || || ||||||
Sbjct 31841 CCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCATA 31792
>seq55
Length=132018
Score = 93.3 bits (102), Expect = 3e-14
Identities = 160/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580
||||||||||||| | || ||||| |||||||| || ||||| |||||||| ||||
Sbjct 8696 CACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGG 8637
Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640
| | || | | || |||||||| || || ||||| ||||| | || || || | |
Sbjct 8636 ACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 8577
Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| | |||||| ||||| || || | | |||| ||| | ||||| |||||
Sbjct 8576 GAATACCTTCCTTGTCTTGGATCTT-GGACTTGACATTGTCAATAGTGTCAGAAGATTCA 8518
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| || | || || || ||||| ||||| || || || || || |||||
Sbjct 8517 ACTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 8468
>seq53
Length=182751
Score = 93.3 bits (102), Expect = 3e-14
Identities = 154/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | || || || || | |||| |||||||| |||||||| || ||
Sbjct 135847 ACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGA 135906
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| || | |||| |||||||| || || ||||| ||||| | || || || | ||
Sbjct 135907 CAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 135966
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||| ||||| ||| || || | |||| ||| | ||||| ||||| |
Sbjct 135967 GATACCTTCCTTGTCTTGAATCTT-TGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 136025
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAA 33740
| || | ||||| || ||||| || || || || |||||
Sbjct 136026 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 136065
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328703194777920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |