Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001750485.1_202016-09- 30] 201 sequences; 11,553,758 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq111 111 1e-19 >seq111 Length=83080 Score = 111 bits (122), Expect = 1e-19 Identities = 154/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 ||||||| ||||| ||| ||| |||||||||||||| || || || || | |||| Sbjct 31776 AACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCT 31717 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 || || ||||| ||||| || |||| | ||||| || | |||| | ||||||| | Sbjct 31716 TCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGT-C 31658 Query 41771 ATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829 ||| |||||| | |||| | | | |||||| || || ||||| | ||||| || Sbjct 31657 TTGAATTTTTGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGT 31598 Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| ||||| ||||| || ||||| ||||| Sbjct 31597 CTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 31565 Score = 89.7 bits (98), Expect = 5e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 ||||||| || || || ||||| || ||||| || || || || || | |||| Sbjct 31548 AACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAATCAGACAGCGTTCTACCGTCT 31489 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 || |||||||| ||||| || |||| | ||||| || | || | | |||||||| Sbjct 31488 TCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCT 31429 Query 41771 ATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829 ||| |||| | | |||| | | | || ||| || || || |||| ||||| || Sbjct 31428 -TGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGT 31370 Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||| |||| ||||| |||||||||||||| Sbjct 31369 TTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 31337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462302838461200