Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001932575.1_202017-01- 05] 213 sequences; 11,693,241 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq159 118 1e-21 seq203 98.7 1e-15 >seq159 Length=504635 Score = 118 bits (130), Expect = 1e-21 Identities = 523/816 (64%), Gaps = 23/816 (3%) Strand=Plus/Plus Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTT- 132683 || || || || ||||| || || ||||||| ||| ||| ||||| |||||||| Sbjct 237614 TTTTCGAAGAAGTTAGTCTTACCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTT 237673 Query 132684 --GGCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAAC 132741 | | ||| ||| | |||| | |||| || |||| | ||| |||||||| |||||| Sbjct 237674 TCGACCTTGTAGTATTTCTTGTTACCGAA-AG--CGACCAACAGTCTGTCGGCGACGAAC 237730 Query 132742 TCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGACGCACCGGCAGCGCTTCG 132801 || | |||||| ||| || || | || |||| | || || | || || Sbjct 237731 TCAACGTATTGGTTCATTAAGTCAGCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTCC 237790 Query 132802 GTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCG 132861 || | | ||| || || | || || |||||||| |||| |||| || | | Sbjct 237791 AAGAAGTATCTTTGTTCAATTTCCACAGCCTCGGTGACAATTTTTTCAACGATGGCTGGG 237850 Query 132862 -CTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTC 132920 || | ||| | |||||| ||||| |||||| ||||||||| ||||| || || Sbjct 237851 TCTGGTTTGTT-CTTCAAATGGGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTC 237909 Query 132921 GTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAG 132980 ||| || | || | ||||||| || || || |||||||| | || | ||||| | Sbjct 237910 GTCTCTACAGATCAATTCGTTGGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAA 237969 Query 132981 CCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCAC 133040 ||| || |||| ||| || || || || ||||| || || | || || || || || Sbjct 237970 CCAGAAAATGGAGGCAAAGGAACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAAC 238029 Query 133041 CAGGCGCTCGCCGAACGTGGCTTCTTTG-CTGGCGATCCAGCGCAGCGCCCATTCGGCCT 133099 || | || || ||| ||| || | || | ||||| | | ||||||||||||| Sbjct 238030 TAGTCTTTCACCAAACAAGGCGTCAGCGTCTTGA-ATCCATCTTAAAGCCCATTCGGCCT 238088 Query 133100 TTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTT---TCTCTTCCG 133156 | || || || || || | ||||| || ||||| || || | |||| | Sbjct 238089 TCTCACCGATTTCTGGGATGGTGTGAATGGCATTGAACAA---GAATTCACTTTCTTTAG 238145 Query 133157 AGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGG 133216 | | ||| || ||||| | || || |||| ||||| | || || || Sbjct 238146 GGTCCTTGATGTAAGTATCGATCAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCA 238205 Query 133217 CGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCT 133276 |||||| || ||||| || | | ||||| | || ||||| | ||| | Sbjct 238206 TGATTTGGAAACCGTAGAAACTCTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTT 238265 Query 133277 CGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTG- 133335 | |||| ||||| || || || ||||| |||||||||||||| || || || | Sbjct 238266 CAACCAAGTTTTCATTAACAATACCGTCAGAAGCGGCGAAAAAGGCAAGAAC--TCTGGA 238323 Query 133336 -ATGAAATGGCGCTCGTTGTCGTTCA---AGCGCTCCCAGTCGCGCGTGTCCTTGGACAG 133391 |||||| | |||||| ||||||| | | |||||| | | ||||| |||| Sbjct 238324 AATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCCAGTCATGGATATCCTTAGACAA 238383 Query 133392 GTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGC 133427 || | || || ||||||| || || || ||||| Sbjct 238384 ATCAATTTCTTCAGCGGTCCAGAAAGAAGCTTCGGC 238419 >seq203 Length=397542 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || | || || ||||||||||| | || || || || || Sbjct 16075 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 16016 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| |||| ||||||| ||||| || || || || | || || Sbjct 16015 GACACGATCGATAACG-TTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCA 15957 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||| || | || | || || || ||||| || |||| | ||| | |||||||| Sbjct 15956 ACAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAA 15897 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||||| | || || || |||||| || | |||||||| || Sbjct 15896 CATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 15849 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| ||||| || || || || || || ||| | || || || | || Sbjct 15619 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 15560 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| |||| || | || || ||||| || || || | || || Sbjct 15559 GACACTATTGACAACGTCAAAAGTAAGATTCAA-GATAAAGAAGGTATCCCTCCGGATCA 15501 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||| | | |||| || || || || || || || | | ||| | |||||||| Sbjct 15500 ACAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAA 15441 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||||| | || || || |||||| || | |||||||| || Sbjct 15440 CATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 15393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500171468289920