Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001932575.1_202017-01- 05] 213 sequences; 11,693,241 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq144 122 2e-22 seq138 120 7e-22 seq203 104 6e-17 seq3 98.7 2e-15 >seq144 Length=97312 Score = 122 bits (134), Expect = 2e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || || || ||||||| ||| ||||||||| | || || ||| Sbjct 10302 ACCGGTAAGACTATTACCCTGGAAGTTGAATCTTCTGACACTATTGACAATGTCAAGTCC 10361 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| ||||| || ||||| ||| || ||| |||||| | ||||| || || ||| Sbjct 10362 AAGATCCAAGACAAGGAAGGTATTCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAG 10421 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || ||||||||||| || |||||| |||| |||||| |||| || || |||||||| ||| Sbjct 10422 CAATTGGAAGATGGTAGAACTTTGTCCGACTACAACATCCAAAAGGAATCTACTCTACAC 10481 Query 206374 CTTGTTTTGAGA 206385 | || |||||| Sbjct 10482 TTGGTCTTGAGA 10493 >seq138 Length=119621 Score = 120 bits (132), Expect = 7e-22 Identities = 152/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237 ||||| ||| || | || || || || |||||||||||||| ||| ||||||||| | Sbjct 66989 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 66930 Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297 || || ||| |||||||||||| || ||||| || || ||| |||||| | Sbjct 66929 TGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 66870 Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357 ||||| || || ||||| |||||||| || || || ||| | || |||||| | || || Sbjct 66869 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAA 66810 Query 206358 AGAGTCTACTCTTCACCTTGTTTTGAGA 206385 ||| || ||| | ||| | || |||||| Sbjct 66809 AGAATCCACTTTGCACTTAGTCTTGAGA 66782 >seq203 Length=397542 Score = 104 bits (114), Expect = 6e-17 Identities = 148/207 (71%), Gaps = 1/207 (0%) Strand=Plus/Minus Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237 ||||| ||| || || ||||| || || || || | || || ||| ||||||||| | Sbjct 15383 TTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCTGACACTAT 15324 Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297 || || ||| || |||||||| || ||||| ||| || ||| |||||| | Sbjct 15323 TGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAGCAAAGATT 15264 Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357 || || ||||| ||||| | |||||||| || || || | || ||||| | || || Sbjct 15263 GATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAATATTCAAAA 15204 Query 206358 AGAGTCTACTCTTCACCTTGTTTTGAG 206384 ||||| |||||||||||||| ||||| Sbjct 15203 GGAGTCCACTCTTCACCTTGTCTTGAG 15177 Score = 98.7 bits (108), Expect = 2e-15 Identities = 143/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 |||||| || ||||| || || || || | || || ||| ||| ||||| | || Sbjct 15605 CAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCCGACACTATTGACAA 15546 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || || ||||||||||| |||||||| || ||||| || ||| | || || Sbjct 15545 CGTCAAAAGTAAGATTCAAGATAAAGAAGGTATCCCTCCGGATCAACAGAGATTGATTTT 15486 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || ||||| | |||||||| || || ||| | || |||||| |||| || || || Sbjct 15485 TGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAACATCCAAAAGGAATC 15426 Query 206364 TACTCTTCACCTTGTTTTGAGA 206385 |||||||||| | || |||||| Sbjct 15425 TACTCTTCACTTGGTGTTGAGA 15404 Score = 91.5 bits (100), Expect = 3e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || | || || ||||| |||||||| || || ||| || ||| Sbjct 16072 CAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCCGAC 16013 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| || || || || || ||||| || || || || Sbjct 16012 ACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAACAG 15953 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | ||||| ||||| |||||| | ||||| || || || ||| | || |||||| || Sbjct 15952 AGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAACATC 15893 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 || || || |||||||||||| | || |||||| Sbjct 15892 CAAAAGGAATCTACTCTTCACTTGGTGTTGAGA 15860 Score = 87.8 bits (96), Expect = 4e-12 Identities = 143/204 (70%), Gaps = 4/204 (2%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 |||||| || ||||| || || || || | || || ||| ||| ||||| | || Sbjct 15833 CAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCCGACACTATTGACAA 15774 Query 206244 AGT--AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATC 206301 || |||| |||| ||||||| || ||||| ||| || || |||||| | || Sbjct 15773 CGTCAAAAGTAAAA--TTCAAGACAAGGAAGGTATTCCTCCAGATCAACAAAGATTGATT 15716 Query 206302 TTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAG 206361 || ||||| ||||| ||||||| || || || || | ||||| ||| | ||||||||| Sbjct 15715 TTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAACATTCAGAAAGAG 15656 Query 206362 TCTACTCTTCACCTTGTTTTGAGA 206385 ||||| | || | || |||||| Sbjct 15655 TCTACGTTGCATTTGGTGTTGAGA 15632 Score = 86.0 bits (94), Expect = 1e-11 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 204757 TCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCC 204816 |||||| || | |||||||||||| || || |||| || ||||||| ||| || || || Sbjct 15860 TCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACC 15919 Query 204817 ATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 ||||| |||||||| ||||| ||||| | || |||||| Sbjct 15920 GTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGA 15959 >seq3 Length=369249 Score = 98.7 bits (108), Expect = 2e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || |||||||||||||| ||| ||||||||| | || || ||| Sbjct 39845 ACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATTGACAATGTCAAGTCC 39904 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| ||||| || ||||| || || ||| |||||| | ||||| || || ||| Sbjct 39905 AAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAG 39964 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || |||||||| || || ||| | | || |||||| |||| || || || ||| | || Sbjct 39965 CAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAAGGAATCCACTTTACAT 40024 Query 206374 CTTGTTTTGAGA 206385 | || |||||| Sbjct 40025 TTGGTCTTGAGA 40036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181817574737173