Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001932575.1_202017-01- 05] 213 sequences; 11,693,241 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq2 82.4 4e-11 >seq2 Length=664174 Score = 82.4 bits (90), Expect = 4e-11 Identities = 260/396 (66%), Gaps = 9/396 (2%) Strand=Plus/Minus Query 64876 AATGTCAGTACTAAATCCTGTGCCAATACCCTTTGAGCCATTTATTAAAATCATCGGAAT 64935 ||||| |||||| | || ||||||||||||| | || || | | |||||| |||| Sbjct 357958 AATGTAAGTACTCCAGCCAGTGCCAATACCCTCAGCACCGTTAACAAGAATCATAGGAAG 357899 Query 64936 AATTGGTGCATAAAAGATAGGCTCAACAATGAGACCATCATCATCCAAATACTT-CAAAA 64994 ||||||| ||| | ||||| || | |||| || | | ||| || | || Sbjct 357898 AATTGGTAAATACCACTCTGGCTCCACTGTTTTCTCATCTTCTTGTATATATTTGTATAA 357839 Query 64995 TGGCATCATCCTCTTTTGGAAATATAGAACGAGTTATTTTATTCAATTGAGTATAAATAT 65054 ||| |||||| | ||||||| |||||||| ||| ||||||| || || |||| Sbjct 357838 TGG-ATCATCAGCAGGGTGAAATATCTTACGAGTTAATTTGTTCAATTCTGTGTAGATAT 357780 Query 65055 ATCT---TTCGGATGCGTGGTCTTGTCCAGTTCGTCGTGTTCCAAACTGACCATTTGGCA 65111 |||| | | | ||| | | ||||| |||||| || || ||| || || | Sbjct 357779 ATCTCGCTGCCGCTGCATCTTTACCACCAGTGGCTCGTGTACCGAAAGCACCGTTAGGTA 357720 Query 65112 TTAATAAATTAATATTGTTTGAACCAATAAAATTCTGAGCCATTCCGATAATTGCTGCAT 65171 || || | ||||||||| || |||| ||| || || || | || ||||| | | Sbjct 357719 ATAGCAAGTAAATATTGTTGGACCCAACAAAGTTTTGGGCTAGCCCAATAATAGTTTGTG 357660 Query 65172 TTAA--ACTCGCTTCACCGTGATGATATCCTGAATGTTCAGAGACATATCCACTAAATTG 65229 || ||| || ||||| || |||||| | | | ||| || ||| || ||| Sbjct 357659 CCAATGACT-GC-TCACCATGGTGATATGCCGTACATTCGCTCACGTATGGTGCAAGTTG 357602 Query 65230 AGCAACTTTTATTTCCGTTGTTAAATTCTTTTTAAA 65265 ||| ||||| | ||||| ||||||| ||||| || Sbjct 357601 AGCTACTTTCAGTTCCGACTTTAAATTTTTTTTGAA 357566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235679388189450