Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001937245.1_202017-01-
05] 40 sequences; 11,926,450 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq7 149 2e-30
seq36 125 2e-23
seq33 111 4e-19
>seq7
Length=436978
Score = 149 bits (164), Expect = 2e-30
Identities = 160/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| |||||||| ||||| || || || ||||| ||||| ||| || |||
Sbjct 386257 CAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCCGAC 386316
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || ||||||||| || ||||| ||||| ||||| || ||||| |||||||||
Sbjct 386317 ACTATTGACAACGTCAAAAGTAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAGCAA 386376
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | || || ||||| || || || |||||||| || || || | || || || |
Sbjct 386377 AGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAATATT 386436
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAG 178135
||||| || || || || || || || |||||
Sbjct 386437 CAAAAGGAGTCCACTCTTCACCTCGTCTTGAG 386468
>seq36
Length=802949
Score = 125 bits (138), Expect = 2e-23
Identities = 159/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || ||| | || || || || || ||||| || || ||| || |||
Sbjct 554354 CAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCTTCTGAC 554295
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| ||||| || ||||| ||||| || || || ||||| |||
Sbjct 554294 ACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAACAA 554235
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| || || || || | |||||||| || ||| | |||| || ||| ||
Sbjct 554234 AGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAACATC 554175
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||| ||||| || || || | || |||||| | |||
Sbjct 554174 CAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGA 554136
>seq33
Length=416248
Score = 111 bits (122), Expect = 4e-19
Identities = 155/215 (72%), Gaps = 2/215 (1%)
Strand=Plus/Plus
Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988
||| || || ||| | || || || || ||||| | || || ||| || ||||| ||
Sbjct 55846 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 55905
Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048
|| || ||||| ||||||||| ||||| ||||| ||||| || ||||| ||| || |
Sbjct 55906 TGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 55965
Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCC-GATTATAACGTCCAAA 178107
||||| || || || || | ||||| || || || |||| | || || ||| | ||||
Sbjct 55966 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAAC-CTTGTCTGACTACAACATTCAAA 56024
Query 178108 AAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||||| || |||| | || |||||| | |||
Sbjct 56025 AAGAATCCACTTTGCACTTAGTCTTGAGATTGAGA 56059
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203730583087760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |