Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001983315.1_202017-02- 02] 236 sequences; 12,005,589 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq2 89.7 5e-13 >seq2 Length=388026 Score = 89.7 bits (98), Expect = 5e-13 Identities = 280/432 (65%), Gaps = 9/432 (2%) Strand=Plus/Plus Query 16202 CACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAAC 16261 || || |||||| || | ||||||||||| | ||| | |||||||||||| ||||| Sbjct 211640 CATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAAAAGGTTAAA 211699 Query 16262 CCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAAT 16321 || ||||| | || | || || |||||||| || | ||||| || || || || || Sbjct 211700 CCGGGCATCATACC-CTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCGGAGAAAAAG 211758 Query 16322 ATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGA 16381 | ||| |||| || ||||| || | || || ||| | || || || | || Sbjct 211759 ACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCAGCGTCTTGA 211818 Query 16382 ATCCATTTCTGTACCCATTCGGCTTTTT----GTTTTATACAATCCATCGTTTCTATGGC 16437 |||||| | |||||||||| || | | ||| | || || | ||||| Sbjct 211819 ATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCT----GGGATGGTGTGAATGGC 211874 Query 16438 CTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTA 16497 || ||||| || |||| | | || | || || ||||| |||| || ||| Sbjct 211875 ATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAGGTATCGATCAACAAGGAGTA 211934 Query 16498 CATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGC 16557 |||| ||||| || || || || || || || || ||||| | ||||| | Sbjct 211935 AGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCTTTGCCTCTGG 211994 Query 16558 TATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGC 16617 ||||| ||||| | | || ||| ||| ||| ||||| || ||||||||| || Sbjct 211995 AATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACCGTCAGAAGC 212054 Query 16618 AGCAAAAAACGC 16629 || ||||| || Sbjct 212055 GGCGAAAAAGGC 212066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511412891327520