Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001983315.1_202017-02- 02] 236 sequences; 12,005,589 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq2 132 5e-26 >seq2 Length=388026 Score = 132 bits (146), Expect = 5e-26 Identities = 341/510 (67%), Gaps = 16/510 (3%) Strand=Plus/Plus Query 13893 CCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCA-ATCCTCGttt 13951 || || ||||||| || | |||||| ||||| ||||| || ||||||| | |||| || Sbjct 211661 CCTTCGTCTCTACAGATCAATTCGTTGGAAAAGGTTAAACCGGGCATCATACCCTC--TT 211718 Query 13952 ttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 14011 ||| ||||| || || | ||||| || ||||| || || | || |||| | ||||| Sbjct 211719 TTTCAACCAGAAAATGGAGGCAAAGGAACCGGAGAAAAAGACACCTTCAATGGAGGCAAA 211778 Query 14012 CGCTATTAATCGTTCTCCAAACGATGCTTTTTTGT-TCGATATCCATTTTCTAGCCCATT 14070 || | || || ||| |||||| | || | || | || |||||| || |||||||| Sbjct 211779 GGCAACTAGTCTTTCACCAAACAAGGCGTCAGCGTCTTGA-ATCCATCTTAAAGCCCATT 211837 Query 14071 CAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATATTCCTTCTCTT 14130 | | || | || || || | ||| ||||| || || |||| | |||| Sbjct 211838 CGGCCTTCTCACCGATTTCTGGGATGGTGTGAATGGCATTGAACAAGAATTCACTTTCTT 211897 Query 14131 TAG--TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTC 14188 ||| | ||||| |||| ||||| || | ||| || |||||||||| || ||||| Sbjct 211898 TAGGGTCCTTGA--TGTAGGTATCGATCAACAAGGAGTAAGTTTCAGAGTGAATATTTTC 211955 Query 14189 CATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAA 14248 || || || ||||| || || | | || || | ||| ||||| | | | || Sbjct 211956 AATCATGATTTGGAAACCGTAGAAACTCTTTGCCTCTGGAATTTGGACTTCGGTGGAGAA 212015 Query 14249 TCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTT 14308 |||| |||| ||||||||||| ||||| ||| ||| || ||||| || | | | Sbjct 212016 GTTTTCAACCAAGTTTTCATTAACAATACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCT 212075 Query 14309 TTTAATAAAGTATTGCTCTTCATTGTTGAGT---TTTTTCCAATC--GGATAAATCCTTA 14363 ||| || || ||| | | ||| | | || ||||| || |||| ||||||| Sbjct 212076 GGAAATGAAAAATCTCTCGTTTTCGTTCATTCTGTTGTTCCAGTCATGGAT--ATCCTTA 212133 Query 14364 GAAAGATCTACTTCATCAACTGTCCAAAAA 14393 || | ||| | ||| ||| | ||||| ||| Sbjct 212134 GACAAATCAATTTCTTCAGCGGTCCAGAAA 212163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479726584802400