Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001983315.1_202017-02- 02] 236 sequences; 12,005,589 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq92 372 4e-98 seq2 206 3e-48 >seq92 Length=38861 Score = 372 bits (412), Expect = 4e-98 Identities = 1345/2078 (65%), Gaps = 57/2078 (3%) Strand=Plus/Minus Query 61991 CAAT-GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 62049 |||| ||||||||||| | ||| ||||| | || || | | ||||||||| || || | Sbjct 11398 CAATAGTGAATTGAATTGCAGCAGATGCAGCTTGGGTTCTCAAATAGTACATACCGGTCT 11339 Query 62050 TTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATCT 62108 | | || |||||||||||||||||||||| |||||||| ||| | || Sbjct 11338 TCAATCCCTTCTTCCATCCGTAAAAATGCATACTTGTTAGTTTACCCATAGTTGGGGCAC 11279 Query 62109 GCTATATGGATA--TTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCA 62166 | || | ||| |||| ||| ||| |||||| || || | | || || |||| Sbjct 11278 G---TAAGAATAAATTCAAAGAATGAGATTGATCAATATAGACAGAACGATCGGCTGCCA 11222 Query 62167 TTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCT 62225 | || ||||| |||||||||| ||||||||||| ||| || || || || | ||| ||| Sbjct 11221 TGTTAATGATAGTCTTTTGTGAAATTTCCCAAACAGTCTTGTATAAGTCCTTCAAT-TCT 11163 Query 62226 TCTGGAAGGTTTG-TATTC--TGAATGGATCCACCATCTGCCATAATCCTATTCT---TG 62279 | ||||| |||| || | |||||||| ||| | || ||||| || || | Sbjct 11162 TGTGGAACATTTGGTAAGCCTTGAATGGAGCCATTTTGTG---TAATCAGATACTGTTTC 11106 Query 62280 ATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT 62339 || | |||| ||| | | || || | | || | | || || || || Sbjct 11105 ATACCCTCATCCCAAATACCTAAATCAACCAAGTCACGCAGTAAGTAAGGGTTCACAACC 11046 Query 62340 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGAC 62399 || ||||| || || || || | || | ||| ||||| || ||||| | | Sbjct 11045 TGGAATTCACCGGATAAGACACGACGGGAGTACATATTGGAAGTGACTGGTTCGAAACAT 10986 Query 62400 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTA 62459 ||||||| ||||| ||||| | || |||||||| ||||| ||||||| || | Sbjct 10985 TCATTATAACCCAATATTTGGGATGTGGATGCAGTAGGCATTGGTGCCATGGTCAAGGAA 10926 Query 62460 TTTCTAAGACCGTATGTTCTGATTTTATCTTTTAG--AGGT-TCCCAATTCCAAAGATCC 62516 ||||||| ||| ||| | | || |||||||| |||| ||||||| ||| | | Sbjct 10925 TTTCTAATACC--ATGCT-TCATGATATCTTTTCTTAAGGTGTCCCAATCCCACATGCCG 10869 Query 62517 GACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACA 62576 | ||| ||||| ||||| | | || |||||| Sbjct 10868 TAGGGTTTTTGGTCCCACATATCAAACTGTAGTATACCTTGAGAAGCAGGAGATCCTTGG 10809 Query 62577 TATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAA 62636 | || |||||||| || ||||||| ||||||||||||| || || | | | | | Sbjct 10808 AAAGTTTCGTATGGACCGTCCTTCTGAGCTAGTTCACAAGAAGCTTCCATGGAGGCATGA 10749 Query 62637 TAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAA 62696 ||||| ||||| ||||| | ||||||| | |||||| ||||||||| || Sbjct 10748 TAAATAGTTTCAAAGATTTGGATATTTAGCAAACGGGCTTCCTCAGAATCAAATGGCAAA 10689 Query 62697 TTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 62756 ||| || || || | ||| || | ||||||||||| | | | || |||||||||||| Sbjct 10688 CGTAACAGCATGAAAGTGTCAGCGAGACCTTGAACACCCAAAGCAATTGGTCTATGTCTC 10629 Query 62757 TTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGA 62816 |||| || || |||||| || ||| || |||||| ||| || | | | || | | Sbjct 10628 ATATTGGATTTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAATGACTCTGTTTAAA 10569 Query 62817 TTTCTGACAATTACTTTGACCACATCCT-TCAGTTTGAGAAAATC-------AAATCGC- 62867 || | || ||||| | | || | | | ||| ||| | || || Sbjct 10568 TTACGAGTAACAACTTTAGCAATTTCATGTAATTTTTTGAAGTTGTATGTGGAAGTCTTA 10509 Query 62868 CCATCTA------TTACAAACA-TGTTC--AAGGCAACAGATGCCAGATTACAAACGGCT 62918 ||||| || ||| | || | |||||||| || |||| |||||||| || Sbjct 10508 CCATCCTCAGAAGTTTCAATGAATGCTGGTAAGGCAACGGAAGCCAAGTTACAAACAGCA 10449 Query 62919 ACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA-AAGATTACTACACTTGATAGT 62977 |||| | | | | |||| | || ||| ||| ||| || | ||||||| Sbjct 10448 GTTTCATCTGGAGCTGAGTATTCAACAATTTCACAGCATAAGTTTGATG-ACTTGATGAC 10390 Query 62978 TCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGT 63037 ||||| |||| ||||||| ||| ||||||| |||||||| |||| || ||| || || Sbjct 10389 ACCTAAGTTTTTTTGATTAGATTTTCTGTTACAAGCATCCTTGTAAACAACGAAAGGTGT 10330 Query 63038 ACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGA 63097 |||||||||| | |||| ||| | ||| | | ||| | | | || || || || Sbjct 10329 ACCAGTTTCAGTTTGAGCTTCCAAAATGGAATACCATAATTTTTGGGCTTTGAT---AGT 10273 Query 63098 TTTGTATCTCCTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAAC 63157 || | | |||| | ||||| | ||||| | || |||||||| || || Sbjct 10272 CTTACCACGACCTTCTTTCTCGTAGCGGGTATATAGAGCCTCAAACTCGTCACCGTAACA 10213 Query 63158 ATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCAC 63217 || | || |||||| | ||| | | || | ||| || | || | || Sbjct 10212 ATCGCTTAAACCAGGAGCTGATGTTGGAGAGAATAATGTCCAGGTCCCATTTTCTTCGAC 10153 Query 63218 TCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTC 63277 || ||||| || |||||||||||||| ||||| || | |||||| | | | ||| Sbjct 10152 ACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTC 10093 Query 63278 CTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTC 63337 ||| || || ||||| ||| ||| | || | | ||||||| |||||| ||||| Sbjct 10092 CTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAAGATATCAGCATGCCATGGTTC 10033 Query 63338 CAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGT 63397 || ||| | ||| | | ||||| | ||| || || ||||| || | || | ||||| Sbjct 10032 CAGGTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCAACATAACGGGCGGT 9973 Query 63398 GTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGAT 63457 |||||| |||| | | ||| ||||| | |||||| || |||| || ||||| | || Sbjct 9972 GTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAAT 9913 Query 63458 ATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGA 63517 || ||| | | |||||| ||| || |||||| || || || || |||| || Sbjct 9912 GTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAGCAGTTTTGGA 9853 Query 63518 GATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTT 63577 || || || ||| || || ||||| || || ||||| || || || ||||| Sbjct 9852 AATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGC 9793 Query 63578 AAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGA 63637 || | ||||| |||||||| | ||| || ||||| || || || ||||| Sbjct 9792 AACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGA 9733 Query 63638 AGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC 63697 ||||| ||||| ||||| ||| | | || ||||| || | ||| | || ||||| Sbjct 9732 GGCGTGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAAGCAGCCTCGATATC 9673 Query 63698 CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTT 63757 | || || |||| |||||| | ||| | | || || || | ||| | | ||| Sbjct 9672 TCTACCGTGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGACGTTCGGCCA-CTT 9614 Query 63758 G-TTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-T 63815 | ||| ||| | | || || || |||||||||||||||||||||||| |||| | Sbjct 9613 GACCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCAAAATAACTGTACT 9554 Query 63816 GAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTATA 63875 ||||| |||| || || | ||| | ||||| | ||||||||| | || | || ||| Sbjct 9553 GAAAA-TCTCTGTCATAGACAATTGCGGAGTTCAATTTATCCTTGTTTTCCATGACAATA 9495 Query 63876 TCCATGGTGATA-CTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAG 63932 | || || | | | || || || |||| | || ||| | || ||| || || Sbjct 9494 T---TGTAGACATCATCAGAGATCATGGGAGCGGGCTTACCAGTAGCAGCATTGACGTAT 9438 Query 63933 TTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGAT 63992 | | | ||| || | |||| | |||| ||||| | |||| || |||| ||| || Sbjct 9437 CTATAAAGATCTTCGACAACTTTAGAAAATTGTTTTGTAGTTTGTTTATGTAAATTAGAA 9378 Query 63993 ACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATG 64030 | ||| |||||||| ||||| |||| ||||| ||||| Sbjct 9377 ATGGCAATTCTGGCCGCTAGGGTGGCGTAATCTGGATG 9340 >seq2 Length=388026 Score = 206 bits (228), Expect = 3e-48 Identities = 590/898 (66%), Gaps = 12/898 (1%) Strand=Plus/Plus Query 32993 CTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTT 33052 |||| |||||||| || |||||||| ||| || | |||||||| || ||||| | Sbjct 211330 CTTG-GACATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCT 211388 Query 33053 TTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttt 33112 | || |||| || || |||||||||||||| || || || || || || ||| | Sbjct 211389 TACCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCT 211448 Query 33113 tAAATCCCAATTCAGAAATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTT 33172 | || || | | || ||| || |||||||| || | ||| ||||| | | Sbjct 211449 TGTTACCGAAAGCGACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGT 211508 Query 33173 CACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAAT-TCTT-GTTCAAT 33230 || ||||| |||| | |||||| | || | ||||| | |||| ||||||| Sbjct 211509 CAGCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTCC--AAGAAGTATCTTTGTTCAAT 211566 Query 33231 GGATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATG 33290 || || || || | ||| | |||| | || ||| | | ||||| Sbjct 211567 TTCCACAGCCTCGGTGACAATTTTTTCAACGATGGCTGGGTCTGGTTTGTTCTTCAAATG 211626 Query 33291 TTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTT 33350 |||| ||| ||||| || ||| ||||| ||| |||||||||| || | |||||| Sbjct 211627 GGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTT 211686 Query 33351 GGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGA 33410 |||||| || | |||||||| | || | |||||| | ||| || ||||| || || || Sbjct 211687 GGAAAAGGTTAAACCGGGCATCATACC-CTCTTTTTCAACCAGAAAATGGAGGCAAAGGA 211745 Query 33411 TCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGC 33470 || || || |||| ||||| | | |||||||||| ||||| || ||| | ||| Sbjct 211746 ACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGC 211805 Query 33471 GCT---GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGT 33527 | ||| || ||||| || |||||| |||||||||| | || || || Sbjct 211806 GTCAGCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGGATGGT 211865 Query 33528 TTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAA 33587 | |||||||| || | | | |||| ||| || || | || ||||||||||| Sbjct 211866 GTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAGGTATCGATCAA 211925 Query 33588 AAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCT 33647 | || |||| || ||||| |||||||| || || || |||||||||| | Sbjct 211926 CAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCTT 211985 Query 33648 AGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCC 33707 ||||| | ||| || ||||| || | || ||| |||| |||||||| || || || Sbjct 211986 TGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACC 212045 Query 33708 GTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGT--GT 33764 |||| || || ||||| || | || || ||| || | ||| | | || | Sbjct 212046 GTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTTTCGTTCAT 212105 Query 33765 TAGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGA 33824 | || ||||| |||| |||||| ||||| | ||| | |||||| | ||||| || || Sbjct 212106 TCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAAGA 212165 Query 33825 TGCCTCTGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACA 33882 || || || || || | |||||| |||| || | ||| ||||||| |||| Sbjct 212166 AGCTTCGGCACGCTTGTAGGCTTGCCAGATTTCATGGTACTTGATAGGGAAAAGAACA 212223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622945362305760