Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001983315.1_202017-02-
02] 236 sequences; 12,005,589 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq2 120 3e-22
>seq2
Length=388026
Score = 120 bits (132), Expect = 3e-22
Identities = 483/746 (65%), Gaps = 31/746 (4%)
Strand=Plus/Plus
Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849
|||||||||| |||||||| || |||| | ||||| ||||| || ||||| || |
Sbjct 211336 CATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCTTACCGGC 211395
Query 92850 CAAAGATATCGAATTCACT---AGTGATTGGATTCTTGGCGTTATAATA---CTTTTCAC 92903
||| || || | ||| | | || || || | | | || || || ||| | ||
Sbjct 211396 CAAGGAGAT-GTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCTTGTTAC 211454
Query 92904 CGATCAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCAC 92963
||| | || ||| | ||| || || || || || | ||| || ||| || |||
Sbjct 211455 CGA---AAGCGACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGTCAG 211511
Query 92964 AATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAA--ATCTTTCT-CGATTA 93020
||||| ||||| | | || |||| ||||| |||||| |||||| | | |||
Sbjct 211512 CGTTCATACCTAGCAAAGCAACTGGTAAGGCGTC---CAAGAAGTATCTTTGTTCAATTT 211568
Query 93021 CAACGGCTTCTTTCAAGATTTCTATTACTCTACTATT--TGG---TGGTTT-TTGTACGA 93074
| || || || | | |||| | || || || ||| |||||| || | | |
Sbjct 211569 CCACAGCCTCGGTGACAATTTTT-----TCAACGATGGCTGGGTCTGGTTTGTTCTTCAA 211623
Query 93075 CATAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACT 93134
|| | ||| ||||| ||||||||||| || ||||||||||||| | ||||| |
Sbjct 211624 -ATGGGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATT 211682
Query 93135 CATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAA 93194
| ||| || |||||||| || | || | | | || || | ||| || || || ||||
Sbjct 211683 CGTTGGAAAAGGTTAAACCGGGCATCA-TACCCTCTTTTTCAACCAGAAAATGGAGGCAA 211741
Query 93195 AACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAAT 93254
| ||| || ||||| | |||||| | || ||||| || || | | ||| ||||
Sbjct 211742 AGGAACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACA 211801
Query 93255 TTGCGGAATTACTGCTG-ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGT 93313
||| | | || |||||| |||||||||| ||||| || | || ||
Sbjct 211802 AGGCGTCA-GCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGG 211860
Query 93314 AGTGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCG 93373
| || | || || || || | | | || | || | | || ||||| ||||||
Sbjct 211861 ATGGTGTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAGGTATCG 211920
Query 93374 ATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAA 93433
|| |||| || || ||||||| || | ||| || || |||||||| |||||||||
Sbjct 211921 ATCAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAA 211980
Query 93434 CATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACT 93493
| | || || | || || ||||| || || | || || | |||||||| ||
Sbjct 211981 CTCTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACA 212040
Query 93494 ATACCATCGGATGCTGCaaaaaaaGC 93519
||||| || || || || ||||| ||
Sbjct 212041 ATACCGTCAGAAGCGGCGAAAAAGGC 212066
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556859157260640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |