Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001983315.1_202017-02- 02] 236 sequences; 12,005,589 total letters Query= NC_015290.1 Length=182180 Score E Sequences producing significant alignments: (Bits) Value seq155 105 8e-18 seq6 87.8 2e-12 >seq155 Length=9661 Score = 105 bits (116), Expect = 8e-18 Identities = 177/251 (71%), Gaps = 15/251 (6%) Strand=Plus/Plus Query 150979 CCAGAAATTCTTGATGGAAGAGTAAAGACTTTACATCCAAAGATTCATGGTGGTATTCTT 151038 |||||||| | | || ||||| || ||||||||||| ||||||||||||| ||| Sbjct 3670 CCAGAAATGTTGGGAGGTAGAGTGAAAACTTTACATCCTGCCGTTCATGGTGGTATCCTT 3729 Query 151039 GCACAACGAGGTAATTC--TAGTCATGATTTAGATCTTAAGGTAAATCGTATTGAAC--- 151093 || ||| | || ||| |||| ||| | |||| | | | |||||| Sbjct 3730 GCT-----AGGGACATCGATAGCGATGAGAAAGACTTGAAGGAACAGCACATTGAAAAAG 3784 Query 151094 -CGATTGATATTGTTGCTGTAAACCTATATCCATTTAAAGAAACTGTTGCTAAACCAGGT 151152 ||||| || | ||| ||||| |||||| ||||| ||||||||||||||||| ||| Sbjct 3785 TCGATT-ATGTCGTT--TGTAA-CCTATACCCATTCAAAGAAACTGTTGCTAAGGTGGGT 3840 Query 151153 GTAACTCTTGCAGAAGCAATTGAGAATATTGACATTGGTGGTCCTAGTATGGTAAGATCA 151212 || ||| || ||||||| | || | ||||| ||||||||| || | | ||||| || Sbjct 3841 GTGACTATTCCAGAAGCCGTAGAAGAAATTGATATTGGTGGTGTTACTCTATTAAGAGCA 3900 Query 151213 GCAGCAAAGAA 151223 || || ||||| Sbjct 3901 GCTGCTAAGAA 3911 >seq6 Length=219423 Score = 87.8 bits (96), Expect = 2e-12 Identities = 174/252 (69%), Gaps = 13/252 (5%) Strand=Plus/Minus Query 150977 CACCAGAAATTCTTGATGGAAGAGTAAAGACTTTACATCCAAAGATTCATGGTGGTATTC 151036 |||||||||| || | || ||||| |||||| | || || | |||| ||||||| Sbjct 21771 CACCAGAAATGCTAGGGGGTAGAGTCAAGACTCTTCACCCTGCTGTGCATGCAGGTATTC 21712 Query 151037 TTGCACAACGAGGTAATTCTAGTC----ATGATTTAGATCTTAAGGTAAATCGTATTGAA 151092 |||| || | |||| ||| |||| |||| | || | | | ||||| Sbjct 21711 TTGC-CA-----GAAATT-TAGAGGGCGATGAAAAAGATTTAAAAGAGCAGCACATTGAT 21659 Query 151093 CCGATTGATATTGTTGC-TGTAAACCTATATCCATTTAAAGAAACTGTTGCTAAACCAGG 151151 | | ||| |||||| ||||| | ||||||| || ||||||||||| |||||| || Sbjct 21658 AAGGTGGATTTTGTTGTATGTAATC-TATATCCGTTCAAAGAAACTGTGGCTAAAATTGG 21600 Query 151152 TGTAACTCTTGCAGAAGCAATTGAGAATATTGACATTGGTGGTCCTAGTATGGTAAGATC 151211 ||| || || |||||| | ||| | ||||||||||| ||| | | || ||||| | Sbjct 21599 TGTTACAGTTCAAGAAGCTGTAGAGGAGATTGACATTGGCGGTGTGACTTTGTTAAGAGC 21540 Query 151212 AGCAGCAAAGAA 151223 ||| |||||||| Sbjct 21539 AGCCGCAAAGAA 21528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582846280598400