Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001983315.1_202017-02- 02] 236 sequences; 12,005,589 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq25 107 2e-18 >seq25 Length=131077 Score = 107 bits (118), Expect = 2e-18 Identities = 208/302 (69%), Gaps = 4/302 (1%) Strand=Plus/Plus Query 171666 AGGTGTTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTT-ATGCGGGTTTA 171724 ||||||||| ||||| | | |||||| |||||||||| ||||||| ||| ||||| | Sbjct 12791 AGGTGTTAAGATTTGGGACGGTAATGGATCTCGTGAATATTTAGATAAGATG-GGGTTCA 12849 Query 171725 CTGAAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGGG 171784 || || |||| ||| ||| | || || ||||||||||||||||||| ||| || | Sbjct 12850 AAGATAGGAAAGTAGGAGATCTGGGGCCCGTTTATGGATTTCAATGGAGGCATTTTGGTG 12909 Query 171785 CTCAATATATCGAC-TGTTATACAGATTACACAGGACAAGGAGTGGACCAATTAAGTCAA 171843 || |||| | ||| || || || || || |||||||| | || ||||| | || Sbjct 12910 CTAAATACA-AGACGTGCGATGACGACTATACTGGACAAGGTATTGATCAATTGAAACAG 12968 Query 171844 ACTATTAATACTTTACAAAACAACCCAGAAAGTAGAAGGATGTTAATTGATAGTTGGAAT 171903 |||| ||| || | | || || | |||||| || | || | ||||| Sbjct 12969 GTTATTCATAAACTAAAGACAAATCCCTACGATAGAAGAATCATTATGAGTGCCTGGAAC 13028 Query 171904 GTACCTCAACTTGATAAAATGGTTCTTCCTCCTTGCCACACTTTAGCACAATTTTATGTC 171963 | || | |||| ||||||| | | || || ||||| | ||| |||| || |||||| Sbjct 13029 CCAGCTGATTTTGACAAAATGGCTTTGCCGCCATGCCATATTTTTTCACAGTTCTATGTC 13088 Query 171964 AG 171965 || Sbjct 13089 AG 13090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628529345832960