Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F002057635.1_202017-03-
21] 17 sequences; 12,242,942 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq2 123 3e-23
seq15 114 2e-20
>seq2
Length=813597
Score = 123 bits (136), Expect = 3e-23
Identities = 385/588 (65%), Gaps = 26/588 (4%)
Strand=Plus/Minus
Query 164398 AATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGACGA 164457
|| |||||||| |||| || ||||| | ||| ||| ||| || ||||||||| ||
Sbjct 400577 AAGTTTGAAGATTTGGGTGTCGGTGGTTTGGATAAAGAGTTTACTAAAATTTTCAGAAGA 400518
Query 164458 GCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAACATATA 164517
|| ||||| | || ||||| | | ||| ||||| | || | ||| |
Sbjct 400517 GCGTTTGCAAGTCGAATCTTTCCTCCTTCAGTTATAGAAAAACTGGGTATTTCTCATGTT 400458
Query 164518 AAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGCATT 164577
||||| | |||| | || ||||| ||| ||||| || ||||| || || |||
Sbjct 400457 AAAGGTTTGCTATTGTACGGTCCTCCAGGTACTGGTAAGACCTTAATTGCAAGAAAGATT 400398
Query 164578 GCT-CAAGCTTTTAAATCGC---GACCCGTTAAAATTGTTAATGGTCCTGAATTATTGAA 164633
| | ||| | | ||| | || || ||||| || |||||||| ||| | ||||
Sbjct 400397 GGTACAA--TGCTGAATGCCAAAGAGCCC--AAAATCGTCAATGGTCCAGAAATTTTGAG 400342
Query 164634 CAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGAAGA 164693
|| || || ||| ||||||| || || | || || ||| |||| || |||| |||
Sbjct 400341 TAAGTACGTTGGTTCTTCAGAAGAAAACATTCGTAATTTATTTAAGGATGCAGAAGCAGA 400282
Query 164694 ACAAAAGAAAGC--AGGTTTAGCTAG-TAAATTACATGTTATTGTTTTTGATGAGATAGA 164750
| | | | || ||| | || | | |||||| ||||| |||| |||||| | ||
Sbjct 400281 ATATAGG---GCCAAGGGTGAGGAATCTTCCTTACATATTATTATTTTCGATGAGCTGGA 400225
Query 164751 TGCTCTTTGCAAAAAACGTGGT------GATAATATTATTCATGATG----CAGTG--GT 164798
| || ||| ||| | | ||| | | || || || | || || ||
Sbjct 400224 TTCTGTTTTCAAGCAGAGAGGTTCAAGAGGTGATGGTACCGGTGTAGGGGACAATGTAGT 400165
Query 164799 TAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATTGTAGG 164858
|||||| ||| | ||||||| |||||||| || || ||||||||||| || | ||
Sbjct 400164 TAATCAATTGTTAGCTAAAATGGATGGTGTTGATCAATTGAATAATATTTTGGTTATTGG 400105
Query 164859 TATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGAATT 164918
||||||||| || |||||||| || |||| | || || || ||| |||| ||| |
Sbjct 400104 TATGACCAATCGTAAAGATTTAATAGACAGTGCTCTTTTGCGTCCAGGTAGATTTGAAGT 400045
Query 164919 GAAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTT 164966
|| | ||||| |||||||| || ||||| | || ||||||||
Sbjct 400044 CCAAGTTGAAATTCATTTACCCGATGAAAAAGGAAGACTCCAAATTTT 399997
>seq15
Length=1091343
Score = 114 bits (126), Expect = 2e-20
Identities = 123/163 (75%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 19341 TAAGATCTTCTAAAATACCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAG 19400
||||| || | || || ||| |||| ||||| || ||||||||| | | |||||| |
Sbjct 613800 TAAGAACTACAAAGATTCCTCAAATTGGTGACAAATTTGCTTCTCGTCACGGTCAAAAGG 613741
Query 19401 GCACATGTGGTATGATTTATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGC 19460
| || |||||| | |||||| |||||||||||| ||||| ||| ||||| || |
Sbjct 613740 GTACTATTGGTATCACATATCGTAGAGAAGATATGCCATTTACCGCAGAAGGTATTGTTC 613681
Query 19461 CGGATCTTATTATTAACCCACATGCTTTTCCAAGTCGAATGAC 19503
| ||| | ||||||||||| |||||| ||||| ||| |||||
Sbjct 613680 CAGATTTGATTATTAACCCTCATGCTATTCCATCTCGTATGAC 613638
Score = 104 bits (114), Expect = 3e-17
Identities = 367/571 (64%), Gaps = 43/571 (8%)
Strand=Plus/Plus
Query 6699 TGGATGAGGATTATAATCTAACAATTCAAAATCTTCAAATTTAAAATCACATAAAT-TAT 6757
||||||||||||||||||| | |||||| ||| || || |||||| | ||| | |
Sbjct 466731 TGGATGAGGATTATAATCTTCAATTTCAAAGTCTGTCAACTTGAAATCA--TCAATGTCT 466788
Query 6758 CAGACtttttttttAATATTACAACAGGTGAA-GGTTTT--ATTGATCGAGTTAATTGTT 6814
|| | ||||||| || | ||| ||| || ||| || || | |||||
Sbjct 466789 TTAACGTCCCTTTTAATCTTTAGTTTCGGGAATGGTCTTGGATT--TCTGGTGATTTGTT 466846
Query 6815 CTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAATAAATT 6874
|||| | || | || || ||| ||||| ||| ||||| || | |||||||| || |
Sbjct 466847 CTTTCAAGGCATCAATGTGGTCTTTATAAACATGTGCATCCCCCAAAGTATGAATGAACT 466906
Query 6875 CACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGAAGCTA 6934
||||||| | ||| || ||| ||| |||||| | || || || ||||| || || |
Sbjct 466907 CACCTGGCTCCATGTCGACAACTTTAGCAATCATTCTAGTCAACAAAGCATATGATGCAA 466966
Query 6935 CATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTGATAACATTGACAAG-ATAAA 6993
||||| ||||| || || |||||||| || | ||| || || ||| || ||
Sbjct 466967 TGTTAAATGGTACTCCCAACCCCATATCACAAGAACGTTGGTACAAT----AAGCATGAA 467022
Query 6994 A---------TATTG------------TCTATAG---------CATAAAATTGACACAAT 7023
| || | ||| | | |||| || || | ||
Sbjct 467023 AGGCGGGGCTTACCGGATCCTTCTCCTTCTTTGGGGAAACTGACATAGAACTGTGAAAAA 467082
Query 7024 ACATGACATGGAGGTAAAACAGCCTGATCTATATCAGATGGATTCCAAGCAGTCATTAAA 7083
| ||| ||||| || ||| | | || | ||||| ||| ||||| ||| |||| |
Sbjct 467083 ATATGGCATGGCGGCAAAGCCATTTTGTCAAAATCAGCTGGGTTCCAGGCACTCATAATG 467142
Query 7084 ATACGTCTATCATTTGGATTTGTTTTTAATTTTGTTATAATTATTTGTAATTGATCTATA 7143
|| | |||||| | |||||||| |||| ||| ||||| || |||||||| |||
Sbjct 467143 ATTCTTCTATCGTAGGGATTTGTCTTTAGTTTATGTATAACCTGTTTCAATTGATCAATA 467202
Query 7144 CCCTGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCCATTGA 7203
|| || || ||| | || || | | || ||||| |||||||| |||||||||
Sbjct 467203 CCTTGTCCAGTATAGTCGTCATCGCACGTCTTGTATTTAGCACCAAAATGCCTCCATTGA 467262
Query 7204 AACCCATAAATAGGACCTAAATCACCTTCTT 7234
|| || |||| || || | ||| ||| |||
Sbjct 467263 AATCCGTAAACGGGCCCCAGATCTCCTACTT 467293
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595871873377200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |