Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F002057805.1_202017-03-
21] 17 sequences; 11,894,910 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq9 199 8e-46
seq12 178 3e-39
seq11 176 9e-39
>seq9
Length=419821
Score = 199 bits (220), Expect = 8e-46
Identities = 176/220 (80%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| |||||||| | || |||||||||| ||| |||||||| || || || || ||||
Sbjct 55135 TACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAG 55076
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | ||||||||||||| | ||| || ||||||||||| | ||||||||| || || |
Sbjct 55075 ACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 55016
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || |||||||| ||||||||||||| || ||||| ||||| || ||| || ||| |
Sbjct 55015 GGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 54956
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAA 82801
|||||||||| || ||||| || ||||| ||||| |||||
Sbjct 54955 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 54916
>seq12
Length=1022186
Score = 178 bits (196), Expect = 3e-39
Identities = 179/230 (78%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| |||||||| | || || || |||| ||||| |||||||| || ||||||||||
Sbjct 53178 TACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAG 53237
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| || ||||||||||||| ||||| || || ||||| || | |||||||||||||||||
Sbjct 53238 ACAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAG 53297
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTT-ACATTTTCAATCGTATCATTAGGTTCT 82760
| || |||||||| |||||||| ||| ||||| || || ||||| || || || |||
Sbjct 53298 GAATACCTTCCTTGTCTTGAAT-TTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCA 53356
Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| || | ||||| ||||| ||||| | || || || || || |||||
Sbjct 53357 ACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 53406
Score = 172 bits (190), Expect = 1e-37
Identities = 158/200 (79%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 82614 GTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCA 82673
|| || || ||||| || || |||||||| || |||||||||||||||| || || ||
Sbjct 53666 GTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTGCTTACCG 53725
Query 82674 GCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTT 82733
|||||||| | |||||||||||||||||| || |||||||| |||||||| || | ||
Sbjct 53726 GCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAATTTTCGACTTA 53785
Query 82734 ACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTC 82793
|| || || || ||||| || ||| |||||||| ||||| || || || ||||| |||
Sbjct 53786 ACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCGGTCAAAGTC 53845
Query 82794 TTTACAAATATCTGCATTAT 82813
|| || || |||||||| ||
Sbjct 53846 TTGACGAAAATCTGCATAAT 53865
Score = 168 bits (186), Expect = 1e-36
Identities = 174/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642
||| |||||||| | || || ||||| ||||||||||| || || || || || || ||
Sbjct 460575 ACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGA 460516
Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702
| | ||||||| ||||| | ||| || ||||||||||| | ||||||||| || || ||
Sbjct 460515 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 460456
Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762
|| |||||||| ||||| ||||| | || ||||| ||||| || ||| || ||| ||
Sbjct 460455 AATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 460396
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || || ||||| || || || ||||| || || || |||||
Sbjct 460395 TTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 460348
Score = 165 bits (182), Expect = 2e-35
Identities = 174/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| |||||||| | || || ||||| ||||||||||| || || || || || ||||
Sbjct 52950 TACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAG 53009
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | ||||||| ||||||||||| || |||||||| || | ||| |||||||| ||||
Sbjct 53010 ACAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAG 53069
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || ||||| |||||||||||||| ||| || || ||||| || || || ||| |
Sbjct 53070 GGATACCTTCTTTATCTTGAATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAA 53129
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| || | ||||| ||||| ||||| | || || || || || |||||
Sbjct 53130 CCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 53178
Score = 165 bits (182), Expect = 2e-35
Identities = 174/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| |||||||| | || || ||||| ||||||||||| || || || || || ||||
Sbjct 53406 TACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAG 53465
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | |||||||||||||||| || || || |||||||| | || |||||||||||||
Sbjct 53466 ACAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAG 53525
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || |||||||| || || || || | || || || || ||||| || | ||| |
Sbjct 53526 GGATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAA 53585
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| || ||||| || || || || ||||| ||||| ||||| ||||||||
Sbjct 53586 CCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 53634
Score = 163 bits (180), Expect = 6e-35
Identities = 177/235 (75%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 82576 ATCACCTACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTAT 82635
|||| |||| || ||||| | || || | ||| ||||| || || || || ||||| |
Sbjct 52716 ATCAGTTACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGT 52775
Query 82636 AATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGAT 82695
| || || || ||||||| ||||||||||| || || ||||| || | |||||| || |
Sbjct 52776 AGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGT 52835
Query 82696 CTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAG 82755
||||||| || |||||||| |||||||| || | || || || ||||| || ||| ||
Sbjct 52836 CTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAG 52895
Query 82756 GTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||| || || | ||||| ||||| ||||||| ||||| ||||| || |||||
Sbjct 52896 ATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 52950
>seq11
Length=657417
Score = 176 bits (194), Expect = 9e-39
Identities = 171/220 (78%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| ||||| || | || || || || | ||| ||||| || || || || || ||||
Sbjct 617352 TACCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAG 617411
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
||||| ||||||||||||| | ||| || ||||||||||| | ||||||||| || || |
Sbjct 617412 ATAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 617471
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || |||||||| ||||| ||||| | || ||||| ||||| || ||| || ||| |
Sbjct 617472 GGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAA 617531
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAA 82801
|||||||||| || ||||| || ||||| ||||| || ||
Sbjct 617532 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 617571
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981826986145763
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |