Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F002057995.1_202017-03-
21] 17 sequences; 11,987,953 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq9 201 3e-46
seq5 197 4e-45
seq15 122 2e-22
>seq9
Length=440919
Score = 201 bits (222), Expect = 3e-46
Identities = 1019/1597 (64%), Gaps = 49/1597 (3%)
Strand=Plus/Minus
Query 363448 GAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGAT 363507
||||| || |||||| || |||||||||| || | ||||||||| | ||| | ||
Sbjct 229713 GAACGTCCTCAGCATTTGGTAATGCGTGTGGCGCTAGGTATCCATGGTAGCGATATCGAA 229654
Query 363508 GCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTG-TA-TTCACGCACGCCACGCCAA 363565
| | | | | || ||||| || | || | | || ||||| ||||| | ||||
Sbjct 229653 TCTGTGCTGAAGACTTATAA--TTTGATGTCGTTAAGATACTTCACTCACGCTTCCCCAA 229596
Query 363566 CAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTC-TAAAAATG 363624
| | | ||| ||||| || | |||| || |||||||| || |||||| | |||
Sbjct 229595 CTTTATTCAACGCTGGTACGCCACATCCTCAAATGTCTTCATG-TTTCTTAATTGCCATG 229537
Query 363625 AAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAG 363684
||||| || || ||||| ||||| | ||| || | || | |||||| | ||||||||
Sbjct 229536 AAGGATGACTCTATCGAAGGTATTTATGATACTTTGAAAGAATGTGCTATGATTTCCAAA 229477
Query 363685 AATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCG 363743
| |||||| || ||||| | ||| |||| | ||| | |||| ||| || ||
Sbjct 229476 ACTGCAGGTGGTGTTGGTCTTCATATCAACAACATCCGTTCCACAGGTTC-TTATAT-CG 229419
Query 363744 C-GGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACT 363801
| || || || |||| | || ||| || |||| ||| ||||||| || | ||||||
Sbjct 229418 CTGGTACCAACGG-TACTTCAAACGGGTTGATTCCTATGATTCGTGTTTTCAATAATACT 229360
Query 363802 GCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAG 363861
|| | || || ||||||||||| ||| | || || || || | | | |||
Sbjct 229359 GCCCGTTATGTGGACCAGGGTGGTAACAAGAGACCTGGTGCTTTCGCCCTTTTCTTGGAG 229300
Query 363862 CCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACG-GGAAAAGAGGA 363920
|| ||||| ||||| || || ||| | || || | |||||||| || || || ||
Sbjct 229299 CCATGGCATGCAGATATCTTCGACTTTGTCGATATCAG-AAAAACACATGGTAAGGAAGA 229241
Query 363921 ATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGT 363980
| | |||||| | ||| ||||| ||| || ||| | |||||| ||| ||||| || ||
Sbjct 229240 AATTCGTGCAAGAGATTTGTTCCCTGCTCTATGGATCCCTGACCTTTTCATGAAACGTGT 229181
Query 363981 GGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCC-AGGTCTTTCCGATG 364039
| | | | | |||| | | |||| || || || || |||| | ||||
Sbjct 229180 TCAAGAGGATGGGCCTTGGACTTTATTTTCGCC-CAGTGCTGCCCCAGGTTTAGATGATG 229122
Query 364040 TATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGC-TCGT 364098
| |||||||| || | || | ||||| || ||| || ||| | | | ||
Sbjct 229121 TGTGGGGTGATGAATTTGAAGAACTATATACTCGTTACGAA----AGAGAAGGTCGTGGT 229066
Query 364099 AAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGA 364158
|| |||||| || || ||| | |||| |||||| || | | |||| || |||||
Sbjct 229065 AAAACAATTAAAGCCCAAAAGTTGTGGTATGCCATTTTGCAAGCACAGACAGAAACAGGT 229006
Query 364159 ACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGT 364218
||||| | ||| | || || || | || ||| | ||| | ||||| ||| || | |||
Sbjct 229005 ACACCTTTCATGGTTTATAAGGACGCATGTAACAGGAAGACAAACCAACAGAACTTAGGT 228946
Query 364219 ACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGAC 364277
|| || || | | ||| ||||| || || | ||||| || | || || || ||
Sbjct 228945 ACTAT-CAAATCATCTAACTTATGTTGTGAAATCGTCGAATATTCCTCCCCGGATGAAAC 228887
Query 364278 TGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT---------AAAAGATGG 364328
||| || ||||| | || || || || || ||||| || || | |||||||
Sbjct 228886 TGCAGTTTGTAATTTAGCTTCTATTGCCCTACCGGCATTCGTTGAGGTTTCAGAAGATGG 228827
Query 364329 TACTTTTGACCACCAGCATCTTTATGACGTAAC---------CTA---TCATGCTACTTG 364376
|| || | | || | | || | || ||| |||| |||
Sbjct 228826 TAAAACTGCAAGCTATAATTTCGA-GAGATTACACGAGATTGCTAAAGTCAT--TACCCA 228770
Query 364377 CAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAA 364436
||| | ||| ||||||||| ||||| |||||| |||| || || ||| ||
Sbjct 228769 CAACTTGAACAGAGTTATCGACCGTAATTACTATCCAGTTCCCGAGGCTAGAAATTCAAA 228710
Query 364437 TATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCT 364496
|||| ||| | || |||| ||||||||| ||||| | || || || ||||||| |
Sbjct 228709 TATGAAGCATAGACCTATTGCTCTTGGTGTCCAGGGTTTGGCCGATACTTATATGATGTT 228650
Query 364497 CAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAAT 364556
| | ||||| ||| || |||| |||||| || | ||||| ||||| ||
Sbjct 228649 GCGTCTACCCTTTGAATCGGAAGAAGCTCAAACTCTAAACAAACAAATCTTCGAAACTAT 228590
Query 364557 GTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCA-AAAACCAAGGGAAAGTACTCTA 364615
|| ||| | | || || ||||| ||||| |||| |||| ||| || ||||
Sbjct 228589 TTACCATGCTACTCTTGAAGCCTCCTGTGAATTGGCCCAAAAAGAAGGTAAA-TATTCTA 228531
Query 364616 CTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGC 364675
||| ||| || || || ||| |||| | || || || ||| | ||||| | | |
Sbjct 228530 CTTTTGAAGGTTCTCCAGCTTCCAAGGGTATTTTACAATTCGATATGTGGAACGCTAAAC 228471
Query 364676 CATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCA 364735
||| || | ||| | ||||| || || | || || || ||||| | |
Sbjct 228470 CATTTGGCATGTGGGATTGGGAAACCTTAAGAAAGGACATTGTTAAACATGGGTTAAGAA 228411
Query 364736 ACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACG 364795
|||| | || || || ||||| || || || ||| | || || || || | || |
Sbjct 228410 ACTCTTTGACTATGGCACCAATGCCAACCGCCTCAACTTCCCAAATTCTTGGTTATAATG 228351
Query 364796 AGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTC 364855
| || |||||||| | || || | || || || || || || || || ||||| |
Sbjct 228350 AATGTTTCGAACCAGTGACTTCAAACATGTACTCTCGTCGTGTCCTGTCTGGTGAATTCC 228291
Query 364856 CGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCA 364915
|| |||||| || || | ||| | ||||| || | |||| ||| || |
Sbjct 228290 AAGTTGTTAATCCATATTTACTACGTGATTTAGTCGACCTGGGTATTTGGGATGATAGTA 228231
Query 364916 TGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAG 364975
|||| | ||| | || | ||||||||| | || | | ||| | ||| |||
Sbjct 228230 TGAAACAATATCTAATTACACAAAATGGTTCTATTCAAGGCTTACCAAATGTGCCACAAG 228171
Query 364976 ATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTC 365012
| ||||| | ||||||||||| |||||||| ||
Sbjct 228170 AATTGAAGGAATTATACAAAACCGTCTGGGAAATCTC 228134
>seq5
Length=575962
Score = 197 bits (218), Expect = 4e-45
Identities = 698/1076 (65%), Gaps = 57/1076 (5%)
Strand=Plus/Plus
Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606
|| || |||||| | ||||| ||| |||||| || |||| || || || ||||| |||
Sbjct 300051 TTTACTCACGCCTCTCCAACGTTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCT 300110
Query 363607 TGCTTTCTTC-TAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAA 363665
|| |||||| | |||||||| || || |||||||| || | ||||| | ||| |
Sbjct 300111 TG-TTTCTTGGTTGCCATGAAGGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGA 300169
Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC 363725
|||||| | |||||||| | ||| || || |||||| || ||||| || ||||| |
Sbjct 300170 ATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTACATATCCATAACATTCGTTC 300229
Query 363726 ACAGAACAG----TTACATTCGCGGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATG 363780
| || | ||||||| || ||| || |||| | || || | |||| |||
Sbjct 300230 A----ACTGGTTCTTACATTGCTGGTACAAACGG-TACTTCTAACGGTTTAATTCCTATG 300284
Query 363781 CTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGG--AGGAAAGCGCAAAG 363838
||||||| || | || ||||| | || || ||||||||||| | |||| | |
Sbjct 300285 ATTCGTGTTTTCAATAACACTGCCCGTTATGTTGACCAGGGTGGTAATAAAAGACC--TG 300342
Query 363839 GGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCC 363898
| |||||||| | || || || || ||||| ||||| ||||| ||| |||| |
Sbjct 300343 GTGCGTTTGCCCTTTACCTGGAACCATGGCATGCTGATATCTTTGATTTTATTGATATTA 300402
Query 363899 GGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTT 363958
|||| ||| || ||||||||| | |||||| | ||| ||||| ||| || ||| ||
Sbjct 300403 GGAAGAACCACGGTAAAGAGGAAATTCGTGCAAGAGATTTGTTCCCTGCTCTATGGATTC 300462
Query 363959 CTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACG 364018
|||| | ||| |||||||| || || | | | || ||| || | || | |||
Sbjct 300463 CTGATCTTTTCATGAAGCGTGTCGAAGAAAATGGGACCTGGACATTATTCTCTCCAACAT 300522
Query 364019 AATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATG 364078
| ||| ||| | |||| | |||||||| | || |||||||| || |
Sbjct 300523 CAGCTCCTGGTTTAAGCGATTGTTACGGTGACGAGTTTGAGGCTCTATATACCCGCTACG 300582
Query 364079 AATCGGAGGGAAAGGC-TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATG 364137
| || ||| | | | ||||||| || || || || |||||| | |||| ||
Sbjct 300583 A----GAAAGAAGGTCGTGGTAAGACTATCAAAGCCCAAAAATTATGGTATTCCATTTTG 300638
Query 364138 GATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAG 364197
|| | || | ||| || || ||||| | | | ||||| ||| | || ||| | ||
Sbjct 300639 GAAGCTCAAACTGAAACTGGTACACCTTTCGTTGTTTACAAGGATGCTTGTAACAGAAAA 300698
Query 364198 TCCAACCAGCAGCACCTTGGT----ACAATTCAGCAGAGCAACCTATGTACCGAGATTAT 364253
|| || || | || | ||| ||| ||| || ||| |||| || ||| |
Sbjct 300699 TCTAATCAAAAAAACTTAGGTGTCATCAAGTCATCA----AACTTATGCTGTGAAATTGT 300754
Query 364254 TGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGC 364313
||||||| | ||||| || || ||||| || |||||| | || || | || | || ||
Sbjct 300755 TGAATACTCAGCTCCAGATGAAACTGCTGTTTGTAACTTGGCTTCCGTTGCCTTACCAGC 300814
Query 364314 GT---TTGTAA------AAGATGGT---ACTTTTGACCAC---CAGCATC-------TTT 364351
| ||| || | |||||| |||| |||| || | || |
Sbjct 300815 ATTCATTGAAACCTCTGAGGATGGTAAGACTT----CCACATACAACTTCAAAAAATTAC 300870
Query 364352 ATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATC 364411
|||| | | | || |||| | ||| | ||| || || || ||||| || |
Sbjct 300871 ATGAAATTGCTAAAGTTGTTACTCGTAATTTAAACAGAGTCATTGATCGTAATTACTACC 300930
Query 364412 CAATTCCTGAAGCCGAG-CGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAG 364470
| || |||| |||| || |||||| | ||| | || |||| | | ||||| ||
Sbjct 300931 CTGTTGAAGAAG-CGAGAAAATCCAATATGAGACATAGACCAATTGCTTTGGGTGTTCAA 300989
Query 364471 GGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTT 364530
|| ||||||||| ||| ||| || | || |||||||||| || || ||| |
Sbjct 300990 GGTCTCGCTGACACTTTCATGCTGTTACGTTTGCCATTTGATTCTGAGGAAGCCCGTTTG 301049
Query 364531 CTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGA 364586
||||||| | ||||||||||| || ||| |||| | ||| ||||| |||||
Sbjct 301050 CTAAATATCCAAATCTTTGAAACTATTTATCATGCCTCCATGGAAGCTTCTTGTGA 301105
>seq15
Length=1072763
Score = 122 bits (134), Expect = 2e-22
Identities = 339/515 (66%), Gaps = 34/515 (7%)
Strand=Plus/Minus
Query 111419 TGTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTC-G 111477
||| || |||||||| || |||||||| ||||| | | ||||| || ||| || |
Sbjct 468698 TGTTAAGATTTGGGACGGTAATGGATCTCGTGAATATTTAGATA-AGATGGGGTTCAAAG 468640
Query 111478 ACAACGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAG 111537
| | ||| ||| ||||| || || |||||||||||||||||| | || ||||||||
Sbjct 468639 ATAGGAAAGTAGGAGATCTGGGGCCCGTTTACGGATTTCAATGGAGGCATTTTGGTGCTA 468580
Query 111538 ACTACAAAACCATGC-ACGACTCATATGATTCACAGGGAACTGATCAATTACAGAATGTC 111596
| ||||| | | ||| | ||| ||| | ||| || | ||||||||| | | ||
Sbjct 468579 AATACAAGA-CGTGCGATGACGACTATACTGGACAAGGTATTGATCAATTGAAACAGGTT 468521
Query 111597 ATTGATCAAATTAAGA-ACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCC 111655
||| || || | |||| | | ||| || | | | || ||||||||||| ||||||||
Sbjct 468520 ATTCATAAACTAAAGACAAATCCCTAC-GATAGAAGAATCATTATGAGTGCCTGGAACCC 468462
Query 111656 AAATGCATTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATG---- 111711
| || || || |||||||| | || ||||| ||| || | | || || ||||
Sbjct 468461 AGCTGATTTTGACAAAATGGCTTTGCCGCCATGCCATATTTTTTCACAATTCTATGTCAG 468402
Query 111712 --TACACGACG--------GGAT-------------GCTTTCATGCCAAATGTATCAGCG 111748
| | | | | |||| ||||||||| | |||| || ||
Sbjct 468401 TTTCCCCAAAGAAGGAGAAGGATCCGGTAAGCCCCGCCTTTCATGCTTATTGTACCAACG 468342
Query 111749 ATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTGCAAGTTACGCACTACTTACTTG 111808
||| |||||| || | || || || ||||| |||||| || || | | ||| |
Sbjct 468341 TTCTTGTGATATGGGGTTGGGAGTACCATTTAACATTGCATCATATGCTTTGTTGACTAG 468282
Query 111809 CTTAATCGCTCATTTTACAAATCTCAAACCGGGTGAATTCATTCACGTTATCGGAGATGC 111868
| || ||| | || | | | || ||||| |||||||| | | || |||||
Sbjct 468281 AATGATTGCTAAAGTTGTCGACATGGAGCCAGGTGAGTTCATTCATACTTTGGGGGATGC 468222
Query 111869 GCATGTTTACACAAACCACATTGATGCACTTAAAA 111903
|||||||| | | ||||||||||||| ||| |||
Sbjct 468221 ACATGTTTATAAAGACCACATTGATGC-CTTGAAA 468188
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303353316113294
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