Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F002057995.1_202017-03- 21] 17 sequences; 11,987,953 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq5 266 4e-66 seq9 138 1e-27 seq2 91.5 2e-13 >seq5 Length=575962 Score = 266 bits (294), Expect = 4e-66 Identities = 890/1367 (65%), Gaps = 36/1367 (3%) Strand=Plus/Plus Query 111627 ATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGACATACGAC 111686 ||| | ||||| | || ||||| || |||||| || ||| ||| || || || || Sbjct 299973 ATGAGAGTCGCACTAGGCATCCACGGTAGAGATATCGAGGCTGCTTTAGAAACGTATAAC 300032 Query 111687 AAGATGTCCCGTGG-TATGTTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACC 111745 |||||| | ||| || || |||| | ||||| | ||||| || ||||| || Sbjct 300033 TTGATGTCTCTAAAATATTTTACTC-ACGCCTCTCCAACGTTGTTCAATGCCGGTACTCC 300091 Query 111746 AAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCAT 111805 || ||| ||||||||| ||||||| | |||| | |||||||| || ||| | || || Sbjct 300092 AAAACCTCAAATGTCCTCTTGTTTCTTGGTTGCCATGAAGGAGGACTCTATCGAGGGGAT 300151 Query 111806 TTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCA 111865 ||||| ||| | | |||||||| || || || ||||||||||| || | || Sbjct 300152 TTACGACACCTTGAAGGAATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTACA 300211 Query 111866 CATCCATGATGTCAGAGCCAACAAGT-CTCGTATTAGAGGTACAAATGGTCAATCAGATG 111924 |||||| | | | | ||| || || ||| |||||||| ||| || | | Sbjct 300212 TATCCATAACATTCGTTC-AACTGGTTCTTACATTGCTGGTACAAACGGTACTTCTAACG 300270 Query 111925 GTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGC 111984 || | ||||| ||| |||| || || || ||| || || ||||| |||| | ||| Sbjct 300271 GTTTAATTCCTATGATTCGTGTTTTCAATAACACTGCCCGTTATGTTGACCAGGGTGGTA 300330 Query 111985 GTCGCAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAG 112040 | ||| || | | || | || || || |||||||| || |||||| | || Sbjct 300331 ATAA-AAGACCTGGTGCGTTTGCCCTTTACCTGGAACCATGGCATGCTGATATCTTTGAT 300389 Query 112041 TTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCC-GCGATCTCTTCTC 112099 || |||| | | ||||| ||| | ||||| || ||| | ||| | ||| | Sbjct 300390 TTTATTGATATTAGGAAGAACCACGGTAAAGAGGAAATTCG-TGCAAGAGATTTGTTCCC 300448 Query 112100 CGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCT 112159 ||||| |||||||| ||||| ||||||||| | || || || | ||| | ||| | | Sbjct 300449 TGCTCTATGGATTCCTGATCTTTTCATGAAGCGTGTCGAAGAAAATGGGACCTGGACATT 300508 Query 112160 CTTTTGTCCAGACAAG-GCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCC 112218 || | |||| ||| || || ||| | |||| ||||| |||||||| || | Sbjct 300509 ATTCTCTCCA-ACATCAGCTCCTGGTTTAAGCGATTGTTACGGTGACGAGTTTGAGGCTC 300567 Query 112219 TCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAGCTGCCGATGTGT 112278 | || || |||||| ||||| |||| | | ||| | ||| | | | Sbjct 300568 TATATACCCGCTACGAGAAAGAAGGTCGTGGTAA---GACTATCAAAGCCCAAAAATTAT 300624 Query 112279 GGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACG 112338 || | | ||| | | ||||||| || ||||||||||| | | ||||||| || | Sbjct 300625 GGTATTCCATTTTGGAAGCTCAAACTGAAACTGGTACACCTTTCGTTGTTTACAAGGATG 300684 Query 112339 CCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTA 112398 | |||||| ||| ||||||||| || || ||||| |||||| || ||| | || Sbjct 300685 CTTGTAACAGAAAATCTAATCAAAAAAACTTAGGTGTCATCAAGTCATCAAACTTATGCT 300744 Query 112399 CAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCG 112458 ||||| | |||| ||| |||||| || ||||| |||||| | || || | | Sbjct 300745 GTGAAATTGTTGAATACTCAGCTCCAGATGAAACTGCTGTTTGTAACTTGGCTTCCGTTG 300804 Query 112459 CTCTCCCC------------AAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAA 112506 | | || | | || |||| |||| |||| | | ||| Sbjct 300805 CCTTACCAGCATTCATTGAAACCTCTGAGGATGGTAAGACTTCCACATACAACTTCAAAA 300864 Query 112507 AACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATT 112566 || | || ||| || | ||| ||| || || |||||||||| |||||| | |||| Sbjct 300865 AATTACATGAAATTGCTAAAGTTGTTACTCGTAATTTAAACAGAGTCATTGATCGTAATT 300924 Query 112567 TTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTG 112626 ||||| ||||| || | ||||| ||||||||||| | ||||||| | | |||| Sbjct 300925 ACTACCCTGTTGAAGAAGCGAGAAAATCCAATATGAGACATAGACCAATTGCTTTGGGTG 300984 Query 112627 TCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGA 112686 | ||||||||||| || ||||| || | || |||||||||| || ||||| Sbjct 300985 TTCAAGGTCTCGCTGACACTTTCATGCTGTTACGTTTGCCATTTGATTCTGAGGAAGCCC 301044 Query 112687 AGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGG 112746 | ||| | || ||||| || || ||||| ||| | | || || || | Sbjct 301045 GTTTGCTAAATATCCAAATCTTTGAAACTATTTATCATGCCTCCATGGAAGCTTCTTGTG 301104 Query 112747 AGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGG 112806 | | || || || |||||||| ||||| || | || ||||| ||||| ||||| Sbjct 301105 AACTAGCTCAGAAGGACGGTCCATACGAAACTTTCCAAGGATCTCCTGCTTCTCAAGGTA 301164 Query 112807 TGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCA-CTACGACTGGGACGCTCTC 112865 | || || ||||||||||||| | | ||| | || | || |||||| | || Sbjct 301165 TACTACAGTTTGATATGTGGG-ACCAAAAACCCTACGGCATGTGGGATTGGGACAC-CTT 301222 Query 112866 AAGGAACG-CATCAAGGAGAAGGGTCTTCGTAACAGTCTTT--TGATGGCACCAATGCCA 112922 ||| || | |||| | || | ||| || | | | || || |||||||||||||| Sbjct 301223 AAGAAAAGATATCATGAAGCATGGTATTAG--AAATTCCTTGACCATGGCACCAATGCCT 301280 Query 112923 ACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 112969 || || ||||| | ||||| |||||| |||||||||| || ||||| Sbjct 301281 ACTGCATCCACATCCCAAATATTGGGTTATAATGAATGTTTCGAACC 301327 >seq9 Length=440919 Score = 138 bits (152), Expect = 1e-27 Identities = 930/1463 (64%), Gaps = 66/1463 (5%) Strand=Plus/Minus Query 111546 TATTTTGGTCTCAAGACCCTCGAGAAAAGCTACCTCCAAAGACTGGATGGTGTCTTGATG 111605 ||||| || ||||||| || ||| ||| | | ||||||| | |||| || Sbjct 229773 TATTTCGGGTTCAAGACACTGGAGCGTTCGTACTTGCTAAGACTGAACGGTGAAGTGGCA 229714 Query 111606 GAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGAT 111665 ||| || ||| | || | ||||| || ||| | ||||||||||| ||||| || Sbjct 229713 GAACGTCCTCAGCATTTGGTAATGCGTGTGGCGCTAGGTATCCATGGTAGCGATATCGAA 229654 Query 111666 TCTGTTTTGGAGACATACGACAAGATGTCCCGT---GGTATGTTCATCCACGCAACACCA 111722 ||||| || |||| || | |||||| || | || |||| ||||| | ||| Sbjct 229653 TCTGTGCTGAAGACTTATAATTTGATGTC--GTTAAGATAC-TTCACTCACGCTTCCCCA 229597 Query 111723 ACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAAC 111782 || | |||||||||||||| ||| || |||||||| |||||| | ||||| | Sbjct 229596 ACTTTATTCAACGCTGGTACGCCACATCCTCAAATGTCTTCATGTTTCTTAATTGCCATG 229537 Query 111783 AAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAG 111842 ||||| || || ||| | || ||||| | ||| | | |||||||| || || || Sbjct 229536 AAGGATGACTCTATCGAAGGTATTTATGATACTTTGAAAGAATGTGCTATGATTTCCAAA 229477 Query 111843 TGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAG-TCTCGTATTAG 111901 || |||||| | || | || ||| | | || | || ||| | ||| ||| Sbjct 229476 ACTGCAGGTGGTGTTGGTCTTCATATCAACAACATCCGTTCC-ACAGGTTCTTATATCGC 229418 Query 111902 AGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGC 111961 ||||| || ||| ||| | || | ||||| ||| |||| || || || || || Sbjct 229417 TGGTACCAACGGTACTTCAAACGGGTTGATTCCTATGATTCGTGTTTTCAATAATACTGC 229358 Query 111962 GCGCTATGTAAACCAAGCTGGGCGTCGCAAGGGATCTATCGCAGTC-----TATCTT-GA 112015 || ||||| |||| | || || |||| || || || || | |||| || Sbjct 229357 CCGTTATGTGGACCAGGGTG---GTAACAAGAGACCTGGTGCTTTCGCCCTTTTCTTGGA 229301 Query 112016 GCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGA 112075 ||||||||| || |||||| | || || | || | | | || ||| | || || Sbjct 229300 GCCATGGCATGCAGATATCTTCGACTTTGTCGATATCAGAAAAACACATGGTAAGGAAGA 229241 Query 112076 GGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAG 112134 | |||| | ||| | ||| | ||||| ||||| || || || |||||||| | | Sbjct 229240 AATTC-GTGCAAGAGATTTGTTCCCTGCTCTATGGATCCCTGACCTTTTCATGAAACGTG 229182 Query 112135 TTGAGGAGAGTGGCAATTGGTCTCTCTTTT-GTCCAGACAAGGCACCCGGTCTCTCCGAT 112193 || | ||| ||| |||| || | |||| | |||| || || ||| | ||| Sbjct 229181 TTCAAGAGGATGGGCCTTGGACTTTATTTTCGCCCAG-TGCTGCCCCAGGTTTAGATGAT 229123 Query 112194 GCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACT 112253 | |||||| || ||||||| || || || ||||| |||| |||| | | Sbjct 229122 GTGTGGGGTGATGAATTTGAAGAACTATATACTCGTTACGAAAGAGAAGGTCGTG---GT 229066 Query 112254 GCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCT-CAAGTCTCAAACCGAGACTGG 112312 || | ||| | ||||| | || ||| | |||| | || || || || || Sbjct 229065 AAAACAATTAAAGCCCAAAAGTTGTGGTATGCCATTTTGCAAG-CACAGACAGAAACAGG 229007 Query 112313 TACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGG 112372 |||||| | ||| |||| || ||||| |||||| |||| || ||| |||| || || Sbjct 229006 TACACCTTTCATGGTTTATAAGGACGCATGTAACAGGAAGACAAACCAACAGAACTTAGG 228947 Query 112373 TGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGAC 112432 | ||||| || ||| | ||| |||||| | |||| | | | ||||| || Sbjct 228946 TACTATCAAATCATCTAACTTATGTTGTGAAATCGTCGAATATTCCTCCCCGGATGAAAC 228887 Query 112433 GGCTGTGTGTAACCTCGCATCAATCGCTCTCCC--CA--AGTATGTGGATCCAGA----G 112484 || || ||||| | || || || || || || || || || || | |||| | Sbjct 228886 TGCAGTTTGTAATTTAGCTTCTATTGCCCTACCGGCATTCGT-TGAGGTTTCAGAAGATG 228828 Query 112485 ACAAA-----GACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAA 112539 ||| | | | ||| || | | | ||||| || | ||| | || | | Sbjct 228827 GTAAAACTGCAAGCTATAATTTCGAGAGATTACACGAGATTGCTAAAGTCATTACCCACA 228768 Query 112540 ACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTT---GAGACTGCTCGTAAATCTA 112596 || | ||||||||||| || | |||| || || ||| ||| ||| | || || | Sbjct 228767 ACTTGAACAGAGTTATCGACCGTAATTACTATCCAGTTCCCGAG---GCTAGAAATTCAA 228711 Query 112597 ATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTT 112656 |||||| || | || |||| ||| |||||||| ||| | || ||| | || | | Sbjct 228710 ATATGAAGCATAGACCTATTGCTCTTGGTGTCCAGGGTTTGGCCGATACTTATATGATGT 228651 Query 112657 GTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATC--AATGCGCGTATATTTGAGAC 112714 || | | ||||| || || ||||| | || || || | || || || || Sbjct 228650 TGCGTCTACCCTTTGAATCGGAAGAAGCTCA--AACTCTAAACAAACAAATCTTCGAAAC 228593 Query 112715 AATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGA 112774 || || || || ||||||| || | || ||||| | || ||| |||| Sbjct 228592 TATTTACCATGCTACTCTTGAAGCCTCCTGTGAATTGGCCCAAAAAGAAGGTAAATATTC 228533 Query 112775 AACCTTTGAGGGTTCTCCAGCTTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTG 112833 || ||||| |||||||||||||| |||||| | | ||||| ||||||| |||| | Sbjct 228532 TACTTTTGAAGGTTCTCCAGCTTC-CAAGGGTATTTTACAATTCGATATGT-GGAACGCT 228475 Query 112834 AGACCAAGCTTCA-CTACGACTGGGACGCTCTCAAGGAACG-CA---TCAAGGAGAAGGG 112888 | |||| || | || ||||| | || ||| || | || | || | | ||| Sbjct 228474 AAACCATTTGGCATGTGGGATTGGGAAAC-CTTAAGAAAGGACATTGTTAA--ACATGGG 228418 Query 112889 TCTTCGTAACAGTCTTT--TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTG 112946 | | | ||| ||||| ||||||||||||||||| ||||| || | ||||| | Sbjct 228417 T-TAAGAAAC--TCTTTGACTATGGCACCAATGCCAACCGCCTCAACTTCCCAAATTCTT 228361 Query 112947 GGTAATAATGAATGCTTTGAACC 112969 ||| |||||||||| || ||||| Sbjct 228360 GGTTATAATGAATGTTTCGAACC 228338 >seq2 Length=808481 Score = 91.5 bits (100), Expect = 2e-13 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 163546 CTATGGGCGTGTTGCGCCACGATCTGGTCTCGCTGTGAAACACGGTATCCAAGTTGGTGC 163605 ||| || ||| |||||||| | || || || || |||||| ||||||||||| ||||| Sbjct 722316 CTACGGTCGTATTGCGCCAAGGTCAGGCCTGGCAGTGAAAAACGGTATCCAAACCGGTGC 722375 Query 163606 GGGTGTTATTGATCCCGACTACACGGGTGAAGTCAAAGTCGTTCTCTTCAATCAT 163660 |||||| | || || ||||| |||||||| ||||| ||| | ||||||||| Sbjct 722376 TGGTGTTGTCGACAGAGATTACACCGGTGAAGTTAAAGTAGTTTTATTCAATCAT 722430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742268092240