Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F002057995.1_202017-03- 21] 17 sequences; 11,987,953 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq12 131 1e-25 seq9 102 7e-17 seq11 89.7 4e-13 >seq12 Length=1027157 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610 || |||||||| || || || || ||||| ||||| || |||||| ||| ||| || Sbjct 472114 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 472173 Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670 || || || | | | || ||||| || ||| ||||| || || | || || Sbjct 472174 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 472233 Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730 ||||| ||| | |||||||| || || |||||||||||| || |||| || |||| || Sbjct 472234 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTAC 472293 Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 ||||| ||||| ||||||||||| ||| |||| || ||||| |||| || Sbjct 472294 AACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 472343 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| || ||| | || ||||| || || ||| || ||| |||| Sbjct 65386 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 65327 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | | | ||| ||||| ||||| || || | || ||||||| Sbjct 65326 GACACTATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 65267 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || ||| | |||||||| || |||||| ||||||| || ||| || | ||||||||| Sbjct 65266 CAAAGATTGATCTTTGCCGGTAAACAACTGGAAGACGGTAGAACGCTGTCTGATTATAAC 65207 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||||| ||||| ||||| |||| |||| || ||||| |||| || || Sbjct 65206 ATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGGTAT 65157 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| || || ||||| |||| || || || || ||| || ||| |||| Sbjct 65158 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 65099 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | | |||| ||||| || ||||| || | || |||||| Sbjct 65098 GACACTATTGACAACGTCAAAAGTAAAATTCAAGATAAAGAAGGTATCCCTCCGGATCAA 65039 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 |||||| | || ||||| || || ||| | |||||| || ||| || | || || ||| Sbjct 65038 CAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAAC 64979 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 || ||||| ||||||||||| ||| |||| || ||||| |||| || || Sbjct 64978 ATCCAAAAGGAATCTACTCTTCACCTGGTGTTGAGATTGAGAGGTGGTAT 64929 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||| || || || || ||||||||||| || || ||| | || Sbjct 65614 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 65555 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || ||| | | | | ||| |||||| ||||| || || | || ||||||| Sbjct 65554 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 65495 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||||| | |||||||| || || || | ||||| || ||| || | || || ||| Sbjct 65494 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAAC 65435 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 || ||||| ||||||||||| ||| |||| || ||||| |||| || || Sbjct 65434 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGGTAT 65385 >seq9 Length=440919 Score = 102 bits (112), Expect = 7e-17 Identities = 157/224 (70%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 28563 TTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCAGAGACGGTG 28622 ||||| || || || || ||||| ||||| || ||| ||| |||| || || | Sbjct 64339 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 64398 Query 28623 GCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTT 28682 | | || ||||| ||| || ||||| || || | || || ||||| ||| | Sbjct 64399 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 64458 Query 28683 ATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAACATTCAAAAA 28742 |||||||| || || ||||||||||| || ||| || | || || |||||||||||| Sbjct 64459 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAA 64518 Query 28743 GAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGATAAT 28786 ||||| ||| ||||| | || || ||||| |||| || || || Sbjct 64519 GAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGGTATCAT 64562 >seq11 Length=667446 Score = 89.7 bits (98), Expect = 4e-13 Identities = 154/224 (69%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 28563 TTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCAGAGACGGTG 28622 || || || || || || ||||| ||||| || ||| ||| |||| || || | Sbjct 617895 TTCGTTAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATT 617836 Query 28623 GCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTT 28682 | | || ||||| || ||| ||||| || || | || || ||||| ||| | Sbjct 617835 GACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 617776 Query 28683 ATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAACATTCAAAAA 28742 |||||||| || || ||||||||||| || |||| | | || || ||||| ||||| Sbjct 617775 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAAG 617716 Query 28743 GAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGATAAT 28786 ||||| ||| | || |||| || |||||| |||| || || || Sbjct 617715 GAATCCACTTTACATTTGGTCTTGAGATTAAGAGGTGGTATCAT 617672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425404711861443