Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F002057995.1_202017-03-
21] 17 sequences; 11,987,953 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq12 147 2e-30
seq9 131 1e-25
seq11 109 4e-19
>seq12
Length=1027157
Score = 147 bits (162), Expect = 2e-30
Identities = 171/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || ||||||||| | ||| || ||||| |||||||||||||| |
Sbjct 65160 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 65219
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | | || || |||||||| || ||| | ||||||||||| ||||| || |||
Sbjct 65220 AGCGTTCTACCGTCTTCCAGTTGTTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGA 65279
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||||| || |||||||| |||||| | || || | || | |||||||||| ||| ||
Sbjct 65280 ATACCTTCCTTGTCTTG-AATTTTCGACTTAACGTTGTCGATAGTGTCAGAAGATTCAAC 65338
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || |||||||| || || || | || || ||||| || |||||
Sbjct 65339 CTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 65386
Score = 138 bits (152), Expect = 9e-28
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| |||||||| | || || | ||||| ||||| || |||||||| || || ||||
Sbjct 64704 CCACCCCTCAACCTCAAGACGAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGAC 64763
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | | ||| || |||||||| || ||| | |||||||||||||| || || |||
Sbjct 64764 AGCGTTCTACCATCTTCTAGTTGTTTACCGGCAAAGATCAATCTTTGCTGGTCTGGAGGA 64823
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||||| || |||||||| |||||||| || || | || | |||||||||| ||| ||
Sbjct 64824 ATACCTTCCTTGTCTTG-AATTTTTGACTTAACGTTGTCAATAGTGTCAGAAGATTCAAC 64882
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || |||||||| || || || | || || || || || |||||
Sbjct 64883 CTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACGAAAATTTGCAT 64930
Score = 131 bits (144), Expect = 1e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || ||||| || || || ||||| ||||| ||||| || || |
Sbjct 472343 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 472284
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | | ||| || | ||| || |||||| | ||||||||||| || || || |||
Sbjct 472283 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 472224
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
||||| || |||||||| | || |||||| | || | |||||||||| ||| |||
Sbjct 472223 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 472164
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
|| || || ||||| || || ||||| || || || || || ||||| ||
Sbjct 472163 TCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 472114
Score = 102 bits (112), Expect = 6e-17
Identities = 152/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634
||||| | ||| | ||||| || || |||||||| ||||| | | || | | ||
Sbjct 65631 AGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCT 65690
Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694
|| || || || || ||| | ||||||||||| ||||| || || ||||| || ||||||
Sbjct 65691 TCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCT 65750
Query 29695 TGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753
|| |||||| | || || | || | || || ||| ||| ||||| | ||||| ||
Sbjct 65751 TG-AATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGT 65809
Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||| || || || || || || || ||||||||
Sbjct 65810 TTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 65842
>seq9
Length=440919
Score = 131 bits (144), Expect = 1e-25
Identities = 162/219 (74%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || || || || | |||||||||||||||||||| || || |
Sbjct 64556 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 64497
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| | | || || | ||| || |||||| | ||||||||||| || || || ||
Sbjct 64496 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 64437
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||||| || |||||||| ||| |||| |||||| | || | |||||||||| ||| ||
Sbjct 64436 ATACCTTCCTTGTCTTG-AATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 64378
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAA 29777
||| | ||| || || || ||||| || || || |||||
Sbjct 64377 TTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 64339
>seq11
Length=667446
Score = 109 bits (120), Expect = 4e-19
Identities = 155/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || || || | || |||||||| | |||||||| ||||| ||||| || || |
Sbjct 617678 CCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 617737
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | | || || | ||| || |||||| | ||||||||||| || || || ||
Sbjct 617738 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 617797
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
||||| || |||||||| | || |||||| | || | ||||||||| ||| |||
Sbjct 617798 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACT 617857
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAA 29777
|| | ||| || || || ||||| || || ||||| ||
Sbjct 617858 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 617895
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385219120187397
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |