Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F002058095.1_202017-03- 21] 17 sequences; 11,821,525 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq5 360 2e-94 seq10 199 5e-46 >seq5 Length=555692 Score = 360 bits (398), Expect = 2e-94 Identities = 1337/2077 (64%), Gaps = 55/2077 (3%) Strand=Plus/Minus Query 52804 CAAT-GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 52862 |||| ||||||||||| | ||| ||||| | || || | | ||||||||| || || | Sbjct 301572 CAATAGTGAATTGAATTGCAGCAGATGCAGCTTGGGTTCTCAAATAGTACATACCGGTCT 301513 Query 52863 TTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGA-ATAACTCGGATCT 52921 | | || ||||||||||||||||||||||||||||||| ||| | || Sbjct 301512 TCAATCCCTTCTTCCATCCGTAAAAATGCATACTTGTTAGTTTACCCATAGTTGGGGCAC 301453 Query 52922 GCTATATGGATA--TTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCA 52979 | || | ||| |||| ||| ||| |||||| || || | | || || |||| Sbjct 301452 G---TAAGAATAAATTCAAAGAATGAGATTGATCAATATAGACAGAACGATCGGCTGCCA 301396 Query 52980 TTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCT 53038 | || ||||| |||||||||| ||||||||||| ||| || || || || | ||| ||| Sbjct 301395 TGTTAATGATAGTCTTTTGTGAAATTTCCCAAACAGTCTTGTATAAGTCCTTCAAT-TCT 301337 Query 53039 TCTGGAAGGTTTG-TATTC--TGAATAGATCCACCATCTACCATAATCCTATTCT---TG 53092 | ||||| |||| || | ||||| || ||| | | ||||| || || | Sbjct 301336 TGTGGAACATTTGGTAAGCCTTGAATGGAGCCATTTTGTG---TAATCAGATACTGTTTC 301280 Query 53093 ATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT 53152 || | |||| ||| | | || || | | || | | || || || || Sbjct 301279 ATACCCTCATCCCAAATACCTAAATCAACCAAGTCACGCAGTAAGTAAGGGTTCACAACC 301220 Query 53153 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGAC 53212 || ||||| || || || || | || | ||| ||||| || ||||| | | | Sbjct 301219 TGGAATTCACCGGATAAGACACGACGGGAGTACATATTGGAAGTGACTGGTTCGAAACAT 301160 Query 53213 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTA 53272 ||||||| ||||| ||||| | || |||||||| ||||| ||||||| || | Sbjct 301159 TCATTATAACCCAATATTTGGGATGTGGATGCAGTAGGCATTGGTGCCATGGTCAAGGAA 301100 Query 53273 TTTCTAAGACCGTATGTTCTGATTTTATCTTTTAG--AGGT-TCCCAATTCCAAAGATCC 53329 ||||||| ||| ||| | | || |||||||| |||| ||||||| ||| | | Sbjct 301099 TTTCTAATACC--ATGCT-TCATGATATCTTTTCTTAAGGTGTCCCAATCCCACATGCCG 301043 Query 53330 GACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACA 53389 | ||| ||||| ||||| | | || |||||| Sbjct 301042 TAGGGTTTTTGGTCCCACATATCAAACTGTAGTATACCTTGAGAAGCAGGAGATCCTTGG 300983 Query 53390 TATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAA 53449 | || ||||||| || ||||||| ||||||||||||| || || | | | | | Sbjct 300982 AAAGTTCCGTATGGACCGTCCTTCTGAGCTAGTTCACAAGAAGCTTCCATGGAGGCATGA 300923 Query 53450 TAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAA 53509 ||||| ||||| ||||| | ||||||| | |||||| ||||||||| || Sbjct 300922 TAAATAGTTTCAAAGATTTGGATATTTAGCAAACGGGCTTCCTCAGAATCAAATGGCAAA 300863 Query 53510 TTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 53569 ||| || || || | ||| || | ||||||||||| | | | || |||||||||||| Sbjct 300862 CGTAACAGCATGAAAGTGTCAGCGAGACCTTGAACACCCAAAGCAATTGGTCTATGTCTC 300803 Query 53570 TTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGG 53629 |||| || || |||||| || ||| || |||||| ||| || | | | || | Sbjct 300802 ATATTGGATTTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAATGACTCTGTTTAAA 300743 Query 53630 TTTCTGACAATTACTTTGACCACATCCT-TCAGTTTGAGAAAATCAAATTGTCCATCTAT 53688 || | || ||||| | | || | | | ||| ||| | | ||| | | | Sbjct 300742 TTACGAGTAACAACTTTAGCAATTTCATGTAATTTTTTGAAGTTGTA--TGTGGAAGTCT 300685 Query 53689 TACAAACATG------TTCAATG-------------CAATAGATGCCAGATTACAAACGG 53729 ||| | | | ||||||| ||| || |||| |||||||| | Sbjct 300684 TACCATCCTCAGAAGTTTCAATGAATGCTGGTAAGGCAACGGAAGCCAAGTTACAAACAG 300625 Query 53730 CTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA-AAGATTACTACACTTGATG 53788 || |||| | | | | |||| | || ||| ||| ||| || | |||||||| Sbjct 300624 CTGTTTCATCTGGAGCTGAGTATTCAACAATTTCACAGCATAAGTTTGATG-ACTTGATG 300566 Query 53789 GTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGC 53848 ||||| |||| ||||||| ||| ||||||| |||||||| |||| || ||| || Sbjct 300565 ACACCTAAGTTTTTTTGATTAGATTTTCTGTTACAAGCATCCTTGTAAACAACGAAAGGT 300506 Query 53849 GTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATA 53908 |||||||||||| | || | ||| | ||| | | ||| | | || || || | Sbjct 300505 GTACCAGTTTCAGTTTGAGCTTCCAAAATGGAATACCATAATTTTTGGGCTTTGAT---A 300449 Query 53909 GATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAA 53968 | || | |||| | ||||| | ||||| | ||||||||||| || || Sbjct 300448 GTCTTACCACGACCTTCTTTCTCGTAGCGGGTATATAGAGCCTCAAACTCGTCACCGTAA 300389 Query 53969 ACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTC 54028 || | || |||||| | ||| | | || | ||| || | || | Sbjct 300388 CAATCGCTTAAACCAGGAGCTGATGTTGGAGAGAATAATGTCCAGGTCCCATTTTCTTCG 300329 Query 54029 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGT 54088 || || ||||| || |||||||||||||| ||||| || | |||||| | | | | Sbjct 300328 ACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATT 300269 Query 54089 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 54148 ||||| || || ||||| ||| ||| | || | | ||||||| |||||| ||| Sbjct 300268 TCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAAGATATCAGCATGCCATGGT 300209 Query 54149 TCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCG 54208 |||| ||| | || | | ||||| | ||| || || ||||| || | || | ||| Sbjct 300208 TCCAGGTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCAACATAACGGGCG 300149 Query 54209 GTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAG 54268 |||||||| |||| | | ||| ||||| | ||| || || | ||| || || || | Sbjct 300148 GTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCA 300089 Query 54269 ATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTA 54328 || || ||| | | |||||| ||| || |||||| || || || || |||| Sbjct 300088 ATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAGCAGTTTTG 300029 Query 54329 GAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATG 54388 || || || || ||| || || || || || || ||||| ||| || ||| ||||| Sbjct 300028 GAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATG 299969 Query 54389 TTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGA 54448 || | ||||| |||||||| | ||| || ||||| || || || ||| Sbjct 299968 GCAACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGA 299909 Query 54449 GAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATA 54508 || ||||| ||||| ||||| ||| | | || ||||| || | ||| | || ||| Sbjct 299908 GAGGCGTGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAAGCAGCCTCGATA 299849 Query 54509 TCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATC 54568 || | || || |||| |||||| | ||| | | || || || | ||| ||| | Sbjct 299848 TCTCTACCGTGGATGCCTAGTGCGACTCTCATGATTAAATGTTGTGGACGTTCGGCGA-C 299790 Query 54569 TTGTT-GTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 54627 ||| ||| ||| | || || || || |||||||||||||||||||||||| |||| Sbjct 299789 TTGACCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCAAAATAACTGTA 299730 Query 54628 -TGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTA 54686 |||||| |||| || || | ||| | ||||| | ||||||||| | || | || | Sbjct 299729 CTGAAAA-TCTCTGTCATAGACAATTGCGGAGTTCAATTTATCCTTGTTTTCCATGACAA 299671 Query 54687 CATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGT 54746 || | | | || || || |||| | || ||| | || |||||| || Sbjct 299670 TATTGTAGACATCATCAGAGATCATGGGAGCGGGCTTACCAGTAGCAGCATTGACGTATC 299611 Query 54747 TAAATAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATA 54806 || | | ||| | | |||| | |||| ||||| | |||| ||| |||| ||| || | Sbjct 299610 TATAAAGATCTTCGACAACTTTAGAAAATTGTTTTGTAGTTTGTTTATGTAAATTAGAAA 299551 Query 54807 CGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATG 54843 ||| |||||||| ||||| |||| ||||| ||||| Sbjct 299550 TGGCAATTCTAGCAGCTAGGGTGGCGTAATCTGGATG 299514 >seq10 Length=1092164 Score = 199 bits (220), Expect = 5e-46 Identities = 590/900 (66%), Gaps = 15/900 (2%) Strand=Plus/Minus Query 23824 CTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTT 23883 |||| |||||||| || |||||||| ||| || | |||||||| || ||||| | Sbjct 758718 CTTG-GACATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCT 758660 Query 23884 TACCTTCTAATGATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGA--TTCT 23941 |||| | || || || ||||||||||||||| | || || || || ||| |||| Sbjct 758659 TACCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCT 758600 Query 23942 TTTAAATCCCAATTCAGAAATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCAT 24001 | | | || || || | || ||| || ||||| ||||| | ||| ||||| | Sbjct 758599 TGTTA--CCGAAAGCAACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAA 758542 Query 24002 TTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAAT-TCTT-GTTCA 24059 ||| ||||| |||| | |||||| | || | ||||| | |||| ||||| Sbjct 758541 GTCAGCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTCC--AAGAAGTATCTTTGTTCA 758484 Query 24060 ATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAA 24119 || || || || || | ||| | || | || ||| | | ||| Sbjct 758483 ATTTCCACAGCCTCGGTGACAATTTTTTCAACAATGGCTGGGTCTGGTTTGTTCTTCAAA 758424 Query 24120 TGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCG 24179 || |||| ||| ||||| || ||| ||| | ||| |||||||||| || |||||| Sbjct 758423 TGGGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCG 758364 Query 24180 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 24239 |||||||| || | |||||||| | || | |||||| | ||| || ||||| ||||| Sbjct 758363 TTGGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAG 758304 Query 24240 GATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCG 24299 || || || || || | ||||| | | |||||||||| |||||||| ||| | | Sbjct 758303 GAACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAG 758244 Query 24300 GCG---CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATT 24356 ||| ||| || ||||| || |||||| |||||||||| | || || Sbjct 758243 GCGTCAGCGTCTTGGATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGGATG 758184 Query 24357 GTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATC 24416 || | || ||||| || | | | |||| ||| || || | || ||||| ||| Sbjct 758183 GTGTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAAGTATCGATC 758124 Query 24417 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACAT 24476 || | || |||| || ||||| |||||||| ||||| || |||||||||| Sbjct 758123 AACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTC 758064 Query 24477 CTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATT 24536 | ||||| | ||| || ||||| | | || ||| | || |||||||| || || Sbjct 758063 TTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATA 758004 Query 24537 CCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGT-- 24593 |||||| || || ||||| || | || || ||| || | ||| ||| || Sbjct 758003 CCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTCTCGTTC 757944 Query 24594 GTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAAT 24653 || || ||||| |||| |||||| ||||| | ||| | |||||| | ||||| || Sbjct 757943 ATTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAA 757884 Query 24654 GATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACA 24713 || || || || || || | |||||| ||||| || | || || |||| |||| Sbjct 757883 GAAGCTTCGGCACGCTTGTAGGCTTGCCAGATTTCATGGTACTTGATAGGGAAAAGAACA 757824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721473834160