Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F002058095.1_202017-03- 21] 17 sequences; 11,821,525 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq5 378 1e-99 seq10 223 5e-53 >seq5 Length=555692 Score = 378 bits (418), Expect = 1e-99 Identities = 1348/2077 (65%), Gaps = 55/2077 (3%) Strand=Plus/Minus Query 78714 CAAT-GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 78772 |||| ||||||||||| | ||| ||||| | || || | | ||||||||| || || | Sbjct 301572 CAATAGTGAATTGAATTGCAGCAGATGCAGCTTGGGTTCTCAAATAGTACATACCGGTCT 301513 Query 78773 TTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATCT 78831 | | || |||||||||| ||||||||||| |||||||| ||| | || Sbjct 301512 TCAATCCCTTCTTCCATCCGTAAAAATGCATACTTGTTAGTTTACCCATAGTTGGGGCAC 301453 Query 78832 GCTATATGGATA--TTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCA 78889 | || | ||| |||| ||| ||| |||||| || || | | || || |||| Sbjct 301452 G---TAAGAATAAATTCAAAGAATGAGATTGATCAATATAGACAGAACGATCGGCTGCCA 301396 Query 78890 TTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCT 78948 | || ||||| |||||||||| ||||||||||| ||| || || || || | ||| ||| Sbjct 301395 TGTTAATGATAGTCTTTTGTGAAATTTCCCAAACAGTCTTGTATAAGTCCTTCAAT-TCT 301337 Query 78949 TCTGGAAGGTTTG-TATTC--TGAATGGATCCACCATCTGCCATAATCCTATTCT---TG 79002 | ||||| |||| || | |||||||| ||| | || ||||| || || | Sbjct 301336 TGTGGAACATTTGGTAAGCCTTGAATGGAGCCATTTTGTG---TAATCAGATACTGTTTC 301280 Query 79003 ATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT 79062 || | |||| ||| | | || || | | || | | || || || || Sbjct 301279 ATACCCTCATCCCAAATACCTAAATCAACCAAGTCACGCAGTAAGTAAGGGTTCACAACC 301220 Query 79063 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGAT 79122 || ||||| || || || || | || | ||| ||||| || |||||| | || Sbjct 301219 TGGAATTCACCGGATAAGACACGACGGGAGTACATATTGGAAGTGACTGGTTCGAAACAT 301160 Query 79123 TCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTA 79182 ||||||| ||||| ||||| | || ||||| || ||||| ||||||| || | Sbjct 301159 TCATTATAACCCAATATTTGGGATGTGGATGCAGTAGGCATTGGTGCCATGGTCAAGGAA 301100 Query 79183 TTTCTAAGACCGTATGATCTGATTTTATCTTTTAG--AGAT-TCCCAATCCCAAAGATCA 79239 ||||||| ||| ||| | | || |||||||| || | ||||||||||| | | Sbjct 301099 TTTCTAATACC--ATGCT-TCATGATATCTTTTCTTAAGGTGTCCCAATCCCACATGCCG 301043 Query 79240 GACGGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTG 79299 | || | ||| | |||| | ||||| ||||| | | ||| |||||| | Sbjct 301042 TAGGGTTTTTGGTCCCACATATCAAACTGTAGTATACCTTGAGAAGCAGGAGATCCTTGG 300983 Query 79300 TATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAA 79359 | ||| | || || || ||||| | |||| ||||||| || || | | | | | Sbjct 300982 AAAGTTCCGTATGGACCGTCCTTCTGAGCTAGTTCACAAGAAGCTTCCATGGAGGCATGA 300923 Query 79360 TAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAA 79419 ||||| ||||| || || | |||| || | ||||| ||||||||| || Sbjct 300922 TAAATAGTTTCAAAGATTTGGATATTTAGCAAACGGGCTTCCTCAGAATCAAATGGCAAA 300863 Query 79420 TTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 79479 ||| || || || | ||| || | ||||||||||| | | | || |||||||||||| Sbjct 300862 CGTAACAGCATGAAAGTGTCAGCGAGACCTTGAACACCCAAAGCAATTGGTCTATGTCTC 300803 Query 79480 TTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGA 79539 |||| || || |||||| || ||| || |||||| ||| || | | | || | | Sbjct 300802 ATATTGGATTTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAATGACTCTGTTTAAA 300743 Query 79540 TTCC---TGACTATT-----ACTTTGACCACATCCTTT--AGTT---TGAGAAAATCAAA 79586 || | | || | | | ||| | || ||| |||| || | || || | Sbjct 300742 TTACGAGTAACAACTTTAGCAATTTCATGTAATTTTTTGAAGTTGTATGTGGAAGTCTTA 300683 Query 79587 TCGTCCATCTA--TTACAAACA-TGTTC--AACGCGACAGATGCCAGATTACAAACGGCT 79641 | ||| | || ||| | || | || || || || |||| |||||||| ||| Sbjct 300682 CCATCCTCAGAAGTTTCAATGAATGCTGGTAAGGCAACGGAAGCCAAGTTACAAACAGCT 300623 Query 79642 ACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTT 79701 |||| | | | | |||| | |||||| ||| | ||| |||| ||| Sbjct 300622 GTTTCATCTGGAGCTGAGTATTCAACAATTTCACAGCATAAGTTTGATGACTTGATGACA 300563 Query 79702 CCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTA 79761 ||||| |||| ||||||| ||| ||||||| |||||||| |||| || ||| || ||| Sbjct 300562 CCTAAGTTTTTTTGATTAGATTTTCTGTTACAAGCATCCTTGTAAACAACGAAAGGTGTA 300503 Query 79762 CCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGAC 79821 ||||||||| | |||| ||| | ||| | | ||| | | | || || || || | Sbjct 300502 CCAGTTTCAGTTTGAGCTTCCAAAATGGAATACCATAATTTTTGGGCTTTGAT---AGTC 300446 Query 79822 TTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACA 79881 || | |||| | ||||| | ||||||| || |||||||| || || | Sbjct 300445 TTACCACGACCTTCTTTCTCGTAGCGGGTATATAGAGCCTCAAACTCGTCACCGTAACAA 300386 Query 79882 TCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACT 79941 ||| ||| |||||| | ||| | | || | ||| |||| || | || Sbjct 300385 TCGCTTAAACCAGGAGCTGATGTTGGAGAGAATAATGTCCAGGTCCCATTTTCTTCGACA 300326 Query 79942 CGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCC 80001 || ||||| || |||||||||||||| ||||| || | |||||| | | | ||| Sbjct 300325 CGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCC 300266 Query 80002 TCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCC 80061 || || || ||||| ||| ||| | || | | ||||||| |||||| |||||| Sbjct 300265 TCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAAGATATCAGCATGCCATGGTTCC 300206 Query 80062 AAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTG 80121 | ||| | ||| | | || |||| ||| || || ||||| || | || | |||||| Sbjct 300205 AGGTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCAACATAACGGGCGGTG 300146 Query 80122 TTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATA 80181 ||||| |||| | | ||| ||||| | ||| || || ||||| || || || | || Sbjct 300145 TTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATG 300086 Query 80182 TAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAG 80241 || ||| | | |||||| ||| || |||||| || || || || |||| || Sbjct 300085 TAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAA 300026 Query 80242 ATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTA 80301 || || || ||| || || || || || || ||||| || || || ||||| | Sbjct 300025 ATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCA 299966 Query 80302 AGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAA 80361 | | ||||| |||||||| | ||| || ||||| || || || ||||| Sbjct 299965 ACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAG 299906 Query 80362 GCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCC 80421 ||||| ||||| ||||| ||||| | || ||||| || | ||| | || ||||| Sbjct 299905 GCGTGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAAGCAGCCTCGATATCT 299846 Query 80422 CATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG 80481 | || || |||| ||||| | ||| | | || || || | ||| ||| |||| Sbjct 299845 CTACCGTGGATGCCTAGTGCGACTCTCATGATTAAATGTTGTGGACGTTCGGCGA-CTTG 299787 Query 80482 -TTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-TG 80539 || ||| | | || ||||| |||||||||||||||||||||||| |||| || Sbjct 299786 ACCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCAAAATAACTGTACTG 299727 Query 80540 AAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACAT 80599 |||| |||| || || | ||| | ||||| | ||||||||| | || | || | || Sbjct 299726 AAAA-TCTCTGTCATAGACAATTGCGGAGTTCAATTTATCCTTGTTTTCCATGACAATAT 299668 Query 80600 CCATGGTGATA-CTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGT 80656 || || | | | || || || |||| | || ||| | || ||| || || Sbjct 299667 ---TGTAGACATCATCAGAGATCATGGGAGCGGGCTTACCAGTAGCAGCATTGACGTATC 299611 Query 80657 TGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATA 80716 | | | ||| || | |||| | |||| ||||| | |||| || |||| ||| || | Sbjct 299610 TATAAAGATCTTCGACAACTTTAGAAAATTGTTTTGTAGTTTGTTTATGTAAATTAGAAA 299551 Query 80717 CGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATG 80753 ||| ||||| || |||| |||| ||||||||||| Sbjct 299550 TGGCAATTCTAGCAGCTAGGGTGGCGTAATCTGGATG 299514 >seq10 Length=1092164 Score = 223 bits (246), Expect = 5e-53 Identities = 592/898 (66%), Gaps = 11/898 (1%) Strand=Plus/Minus Query 49649 CTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTT 49708 |||| |||||||| || |||||||| ||| || | |||||||| || ||||| | Sbjct 758718 CTTG-GACATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCT 758660 Query 49709 TTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttt 49768 | || |||| || || |||||||||||||| || || || || || || ||| | Sbjct 758659 TACCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCT 758600 Query 49769 tAAATCCCAATTCAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTT 49828 | || || || | || ||| || ||||| || || | ||| ||||| | | Sbjct 758599 TGTTACCGAAAGCAACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGT 758540 Query 49829 CACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAAT-TCTT-GTTCAAT 49886 || ||||| |||| | |||||| | || | ||||| | |||| ||||||| Sbjct 758539 CAGCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTCC--AAGAAGTATCTTTGTTCAAT 758482 Query 49887 GGATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATG 49946 || || || || | ||| | ||| | || ||| | | ||||| Sbjct 758481 TTCCACAGCCTCGGTGACAATTTTTTCAACAATGGCTGGGTCTGGTTTGTTCTTCAAATG 758422 Query 49947 TTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTT 50006 |||| ||| ||||| || ||| ||||| ||| |||||||||| || | |||||| Sbjct 758421 GGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTT 758362 Query 50007 GGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGA 50066 |||||| || | |||||||| | || | |||||| | ||| || ||||| ||||| || Sbjct 758361 GGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGA 758302 Query 50067 CCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGC 50126 || || || |||| ||||| | | |||||||||||| ||||| || ||| | ||| Sbjct 758301 ACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGC 758242 Query 50127 G---CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGT 50183 | ||| || ||||| || |||||| |||||||||| | || || || Sbjct 758241 GTCAGCGTCTTGGATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGGATGGT 758182 Query 50184 TTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAA 50243 | |||||||| || | | | |||| ||| || || | |||||||||||||| Sbjct 758181 GTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAAGTATCGATCAA 758122 Query 50244 AAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCT 50303 | || |||| || ||||| |||||||| || || || |||||||||| | Sbjct 758121 CAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCTT 758062 Query 50304 AGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCC 50363 ||||| | ||| || ||||| || | || |||| | || |||||||| || || || Sbjct 758061 TGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACC 758002 Query 50364 GTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTT---GGGTGT 50420 |||| || || ||||| || | || || ||| | | ||||| | | Sbjct 758001 GTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTCTCGTTCAT 757942 Query 50421 TAGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGA 50480 | || ||||| |||| |||||| ||||| | ||| | |||||| | ||||| || || Sbjct 757941 TCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAAGA 757882 Query 50481 TGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACA 50538 || || || || || | |||||| ||||| || | ||| ||||||| |||| Sbjct 757881 AGCTTCGGCACGCTTGTAGGCTTGCCAGATTTCATGGTACTTGATAGGGAAAAGAACA 757824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268647367880