Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F002058095.1_202017-03- 21] 17 sequences; 11,821,525 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq5 370 1e-97 seq10 192 7e-44 >seq5 Length=555692 Score = 370 bits (410), Expect = 1e-97 Identities = 1341/2075 (65%), Gaps = 51/2075 (2%) Strand=Plus/Minus Query 61846 CAAT-GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 61904 |||| ||||||||||| | ||| ||||| | || || | | ||||||||| || || | Sbjct 301572 CAATAGTGAATTGAATTGCAGCAGATGCAGCTTGGGTTCTCAAATAGTACATACCGGTCT 301513 Query 61905 TTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATCT 61963 | | || |||||||||||||||||||||| |||||||| ||| | || Sbjct 301512 TCAATCCCTTCTTCCATCCGTAAAAATGCATACTTGTTAGTTTACCCATAGTTGGGGCAC 301453 Query 61964 GCTATATGGATA--TTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCA 62021 | || | ||| |||| ||| ||| |||||| || || | | || || |||| Sbjct 301452 G---TAAGAATAAATTCAAAGAATGAGATTGATCAATATAGACAGAACGATCGGCTGCCA 301396 Query 62022 TTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCT 62080 | || || || |||||||||| ||||||||||| ||| || || || || | ||| ||| Sbjct 301395 TGTTAATGATAGTCTTTTGTGAAATTTCCCAAACAGTCTTGTATAAGTCCTTCAAT-TCT 301337 Query 62081 TCTGGAAGGTTTG-TATTC--TGAATGGATCCACCATCTGCCATAATCCTATTCT---TG 62134 | ||||| |||| || | |||||||| ||| | || ||||| || || | Sbjct 301336 TGTGGAACATTTGGTAAGCCTTGAATGGAGCCATTTTGTG---TAATCAGATACTGTTTC 301280 Query 62135 ATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT 62194 || | |||| ||| | | || || | | || | | || || || || Sbjct 301279 ATACCCTCATCCCAAATACCTAAATCAACCAAGTCACGCAGTAAGTAAGGGTTCACAACC 301220 Query 62195 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGAC 62254 || ||||| || || || || | || | ||| ||||| || ||||| | | | Sbjct 301219 TGGAATTCACCGGATAAGACACGACGGGAGTACATATTGGAAGTGACTGGTTCGAAACAT 301160 Query 62255 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTA 62314 ||||||| ||||| ||||| | || |||||||| ||||| ||||||| || | Sbjct 301159 TCATTATAACCCAATATTTGGGATGTGGATGCAGTAGGCATTGGTGCCATGGTCAAGGAA 301100 Query 62315 TTTCTAAGACCGTATGTTCTGATTTTATCTTTTAG--AGGT-TCCCAATTCCAAAGATCC 62371 ||||||| ||| ||| | | || |||||||| |||| ||||||| ||| | | Sbjct 301099 TTTCTAATACC--ATGCT-TCATGATATCTTTTCTTAAGGTGTCCCAATCCCACATGCCG 301043 Query 62372 GACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACA 62431 | ||| ||||| ||||| | | || |||||| Sbjct 301042 TAGGGTTTTTGGTCCCACATATCAAACTGTAGTATACCTTGAGAAGCAGGAGATCCTTGG 300983 Query 62432 TATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAA 62491 | || ||||||| || ||||||| ||||||||||||| || || | | | | | Sbjct 300982 AAAGTTCCGTATGGACCGTCCTTCTGAGCTAGTTCACAAGAAGCTTCCATGGAGGCATGA 300923 Query 62492 TAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAA 62551 ||||| ||||| ||||| | ||||||| | |||||| ||||||||| || Sbjct 300922 TAAATAGTTTCAAAGATTTGGATATTTAGCAAACGGGCTTCCTCAGAATCAAATGGCAAA 300863 Query 62552 TTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 62611 ||| || || || | ||| || | ||||||||||| | | | || |||||||||||| Sbjct 300862 CGTAACAGCATGAAAGTGTCAGCGAGACCTTGAACACCCAAAGCAATTGGTCTATGTCTC 300803 Query 62612 TTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGA 62671 |||| || || |||||| || ||| || |||||| ||| || | | | || | | Sbjct 300802 ATATTGGATTTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAATGACTCTGTTTAAA 300743 Query 62672 TTTCTGACAATTACTTTGACCACATCCT-TCAGTTTGAGAAAATC-------AAATCGC- 62722 || | || ||||| | | || | | | ||| ||| | || || Sbjct 300742 TTACGAGTAACAACTTTAGCAATTTCATGTAATTTTTTGAAGTTGTATGTGGAAGTCTTA 300683 Query 62723 CCATCTA------TTACAAACA-TGTTC--AATGCAACAGATGCCAGATTACAAACGGCT 62773 ||||| || ||| | || | || ||||| || |||| |||||||| ||| Sbjct 300682 CCATCCTCAGAAGTTTCAATGAATGCTGGTAAGGCAACGGAAGCCAAGTTACAAACAGCT 300623 Query 62774 ACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA-AAGATTACTACACTTGATGGT 62832 |||| | | | | |||| | || ||| ||| ||| || | |||||||| Sbjct 300622 GTTTCATCTGGAGCTGAGTATTCAACAATTTCACAGCATAAGTTTGATG-ACTTGATGAC 300564 Query 62833 TCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGT 62892 ||||| |||| ||||||| ||| ||||||| |||||||| |||| || ||| || || Sbjct 300563 ACCTAAGTTTTTTTGATTAGATTTTCTGTTACAAGCATCCTTGTAAACAACGAAAGGTGT 300504 Query 62893 ACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGA 62952 |||||||||| | |||| ||| | ||| | | ||| | | | || || || || Sbjct 300503 ACCAGTTTCAGTTTGAGCTTCCAAAATGGAATACCATAATTTTTGGGCTTTGAT---AGT 300447 Query 62953 TTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAAC 63012 || | |||| | ||||| | ||||| | || |||||||| || || Sbjct 300446 CTTACCACGACCTTCTTTCTCGTAGCGGGTATATAGAGCCTCAAACTCGTCACCGTAACA 300387 Query 63013 ATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCAC 63072 || | | |||||| | ||| | | || | ||| || | || | || Sbjct 300386 ATCGCTTAAACCAGGAGCTGATGTTGGAGAGAATAATGTCCAGGTCCCATTTTCTTCGAC 300327 Query 63073 TCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTC 63132 || ||||| || |||||||||||||| ||||| || | |||||| | | | ||| Sbjct 300326 ACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTC 300267 Query 63133 CTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTC 63192 ||| || || ||||| ||| ||| | || | | ||||||| |||||| ||||| Sbjct 300266 CTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAAGATATCAGCATGCCATGGTTC 300207 Query 63193 CAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGT 63252 || ||| | ||| | | ||||| | ||| || || ||||| || | || | ||||| Sbjct 300206 CAGGTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCAACATAACGGGCGGT 300147 Query 63253 GTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGAT 63312 |||||| |||| | | ||| ||||| | ||| || || ||||| || || || | || Sbjct 300146 GTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAAT 300087 Query 63313 ATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGA 63372 || ||| | | |||||| ||| || |||||| || || || || |||| || Sbjct 300086 GTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAGCAGTTTTGGA 300027 Query 63373 GATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTT 63432 || || || ||| || || || || || || ||||| ||| || ||| ||||| Sbjct 300026 AATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGC 299967 Query 63433 AAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGA 63492 || | ||||| |||||||| | ||| || ||||| || || || ||||| Sbjct 299966 AACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGA 299907 Query 63493 AGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC 63552 ||||||||||| ||||| ||| | | || ||||| || | ||| | || ||||| Sbjct 299906 GGCGTGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAAGCAGCCTCGATATC 299847 Query 63553 CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTT 63612 | || || |||| |||||| | ||| | | || || || | ||| ||| ||| Sbjct 299846 TCTACCGTGGATGCCTAGTGCGACTCTCATGATTAAATGTTGTGGACGTTCGGCGA-CTT 299788 Query 63613 GTT-GTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-T 63670 | ||| ||| | | || || || |||||||||||||||||||||||| |||| | Sbjct 299787 GACCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCAAAATAACTGTACT 299728 Query 63671 GAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACA 63730 ||||| |||| || || | ||| | ||||| | ||||||||| | || | || | | Sbjct 299727 GAAAA-TCTCTGTCATAGACAATTGCGGAGTTCAATTTATCCTTGTTTTCCATGACAATA 299669 Query 63731 TCCATGGTAATACTTGAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTG 63790 | | | | || || || ||| | || ||| | || |||||| || | Sbjct 299668 TTGTAGACATCATCAGAGATCATGGGAGCGGGCTTACCAGTAGCAGCATTGACGTATCTA 299609 Query 63791 AATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACG 63850 | | ||| || | |||| | |||| ||||| | |||| ||| |||| ||| || | | Sbjct 299608 TAAAGATCTTCGACAACTTTAGAAAATTGTTTTGTAGTTTGTTTATGTAAATTAGAAATG 299549 Query 63851 GCTATTCTAGCGGCTAGAATGGCATAATCCGGATG 63885 || |||||||| ||||| |||| ||||| ||||| Sbjct 299548 GCAATTCTAGCAGCTAGGGTGGCGTAATCTGGATG 299514 >seq10 Length=1092164 Score = 192 bits (212), Expect = 7e-44 Identities = 586/898 (65%), Gaps = 11/898 (1%) Strand=Plus/Minus Query 32350 CTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTT 32409 |||| |||||||| || |||||||| ||| || | |||||||| || ||||| | Sbjct 758718 CTTG-GACATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCT 758660 Query 32410 TACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGGTAACATTATAAAtttttt 32469 |||| | || || || ||||||||||||||||| || || || || || ||| | Sbjct 758659 TACCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCT 758600 Query 32470 tAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTT 32529 | || || || | || ||| || ||||| || || | ||| ||||| | | Sbjct 758599 TGTTACCGAAAGCAACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGT 758540 Query 32530 CACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAAT-TCTT-GTTCAAT 32587 || ||||| |||| | |||||| | || | ||||| | |||| ||||||| Sbjct 758539 CAGCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTCC--AAGAAGTATCTTTGTTCAAT 758482 Query 32588 AGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATG 32647 || || || || | ||| | || | || ||| | | ||||| Sbjct 758481 TTCCACAGCCTCGGTGACAATTTTTTCAACAATGGCTGGGTCTGGTTTGTTCTTCAAATG 758422 Query 32648 TTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTT 32707 |||| ||| ||||| || ||| ||| | ||| |||||||||| || |||||||| Sbjct 758421 GGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTT 758362 Query 32708 GGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGA 32767 |||||| || | |||||||| | || | |||||| | ||| || ||||| ||||| || Sbjct 758361 GGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGA 758302 Query 32768 TCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGC 32827 || || || || | ||||| | | |||||||||| ||||| || ||| | ||| Sbjct 758301 ACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGC 758242 Query 32828 G---CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGT 32884 | ||| || ||||| || |||||| |||||||||| | || || || Sbjct 758241 GTCAGCGTCTTGGATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGGATGGT 758182 Query 32885 CTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAA 32944 | || ||||| || | | | |||| ||| || || | || ||||| ||||| Sbjct 758181 GTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAAGTATCGATCAA 758122 Query 32945 AAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCT 33004 | || |||| || ||||| |||||||| ||||| || |||||||| | | Sbjct 758121 CAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCTT 758062 Query 33005 AGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCC 33064 ||||| | ||| || ||||| || | || ||| | || |||||||| || || || Sbjct 758061 TGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACC 758002 Query 33065 GTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGT--GT 33121 |||| || || ||||| || | || || ||| || | ||| ||| || | Sbjct 758001 GTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTCTCGTTCAT 757942 Query 33122 TAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGA 33181 | || ||||| |||| |||||| ||||| | ||| | |||||| | ||||| || || Sbjct 757941 TCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAAGA 757882 Query 33182 TGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACA 33239 || || || || || | |||||| ||||| || | || || |||| |||| Sbjct 757881 AGCTTCGGCACGCTTGTAGGCTTGCCAGATTTCATGGTACTTGATAGGGAAAAGAACA 757824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631865353200