Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F002058645.1_202017-03- 21] 17 sequences; 11,964,015 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq5 194 2e-44 seq9 163 3e-35 seq10 134 1e-26 >seq5 Length=575802 Score = 194 bits (214), Expect = 2e-44 Identities = 422/629 (67%), Gaps = 2/629 (0%) Strand=Plus/Minus Query 38006 CATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTT 38065 ||| || ||| || || | ||| || | |||||| | ||||| |||| || |||||| Sbjct 293728 CATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTC 293669 Query 38066 TGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAG 38125 | | | | ||| || || || ||||| || | | |||||| || ||||||| Sbjct 293668 TTGCACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAAGATATCAG 293609 Query 38126 CGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAA 38185 | ||||||||||| | |||| | | || || |||||||||| ||| ||||| | || Sbjct 293608 CATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCAA 293549 Query 38186 TATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGT 38245 ||| | | |||||||| | | | | |||||| | || ||| ||||| | |||| Sbjct 293548 CATAACGGGCGGTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGT 293489 Query 38246 TTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCAC 38305 || |||| | || |||| ||| | | || || ||| || | || || |||| Sbjct 293488 TTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCAC 293429 Query 38306 CTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGT 38365 | ||| ||| || || ||||| |||| || || || || | || || || ||| || Sbjct 293428 CAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGT 293369 Query 38366 CATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAA 38425 | ||||| || | | | |||||| ||||||||||| |||||| ||||| || | Sbjct 293368 CCTCCTTCATGGCAACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTGA 293309 Query 38426 ATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTA 38485 | || || ||||| || || | || ||||| |||| | ||||| ||||||| Sbjct 293308 ACAACGTTGGAGAGGCGTGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAAG 293249 Query 38486 CATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTC 38545 || | || ||||| | ||||| || ||||| | || ||||| | | ||||||||| | Sbjct 293248 CAGCCTCGATATCTCTACCGTGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGAC 293189 Query 38546 TTTCTATTATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAATGTTTTTATTCCAA 38605 ||| | || | || | | |||| ||| || ||| || ||||| | |||| Sbjct 293188 GTTCGGCCACTTGACCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCAA 293129 Query 38606 AATAACTATA-TGAATAATCTCTATCGTA 38633 ||||||| || |||| ||||||| || || Sbjct 293128 AATAACTGTACTGAA-AATCTCTGTCATA 293101 Score = 181 bits (200), Expect = 1e-40 Identities = 534/815 (66%), Gaps = 15/815 (2%) Strand=Plus/Minus Query 36814 GATGCCGATTTTGTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAA 36873 ||||| | || ||||||| ||| ||||| || || || | ||| ||||||||||| Sbjct 294938 GATGCAGCTTGGGTTCTCAAATAGTACATACCGGTCTTCAATCCCTTCTTCCATCCGTAA 294879 Query 36874 AAATGCATACTGGTCAGTTTTGCGTATGTAGGATTATCTATATATATTGTCATTGATTGA 36933 ||||||||||| || ||||| | || || | || ||| ||| || ||| Sbjct 294878 AAATGCATACTTGTTAGTTTACCCATAGTTGGGGCACGTAAGAATAAATTCAAAGAATGA 294819 Query 36934 CTTTGATCTATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTTTGAGATATC 36993 |||||| ||| | || | ||||||||||| | | ||| ||||| || || Sbjct 294818 GATTGATCAATATAGACAGAACGATCGGCTGCCATGTTAATGATAGTCTTTTGTGAAATT 294759 Query 36994 TCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAAATCT---AAATGTTGAATA 37050 |||||||| || || |||| | || | | | ||| | || | || |||||| Sbjct 294758 TCCCAAACAGTCTTGTATAAGTCCTTCAATTCTTGTGGAACATTTGGTAAGCCTTGAATG 294699 Query 37051 GAACCATTATGT---AACACAATTGTATTCTTT-ATGTCATTATTCCACATATTTCTACT 37106 || ||||| ||| | || | || | ||| || | | || ||| ||| | | Sbjct 294698 GAGCCATTTTGTGTAATCAGA----TACTGTTTCATACCCTCATCCCAAATACCTAAATC 294643 Query 37107 TATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTTCT 37166 | | || | || || || || || |||||||| || || || ||||| || | | Sbjct 294642 AACCAAGTCACGCAGTAAGTAAGGGTTCACAACCTGGAATTCACCGGATAAGACACGACG 294583 Query 37167 TGTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGT 37226 | || |||||| ||| |||||| | | ||||||| || |||||||| ||||| Sbjct 294582 GGAGTACATATTGGAAGTGACTGGTTCGAAACATTCATTATAACCCAATATTTGGGATGT 294523 Query 37227 AGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTCAATCCATG-TGTATTAATTC 37285 |||||||||||||||||||| || | | |||||| | ||||| | || | || Sbjct 294522 GGATGCAGTAGGCATTGGTGCCATGGTCAAGGAATTTCTAATACCATGCTTCATGATATC 294463 Query 37286 TCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTTCTT-TAACCACATATCATAT 37344 | || || || | | ||||||||| | | || ||||| || |||||||||| | Sbjct 294462 TTTTCTTAAGGT-GTCCCAATCCCA-CATGCCGTAGGGTTTTTGGTCCCACATATCAAAC 294405 Query 37345 TGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTA 37404 ||||| ||||||| | || ||||| | | | || || || || |||| | | | Sbjct 294404 TGTAGTATACCTTGAGAAGCAGGAGATCCTTGGAAAGTTTCGTATGGACCGTCCTTCTGA 294345 Query 37405 GCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTT 37464 |||||||| ||| || ||| | | ||||| ||| || ||||| || ||||| |||||| Sbjct 294344 GCTAGTTCACAAGAAGCTTCCATGGAGGCATGATAAATAGTTTCAAAGATTTGGATATTT 294285 Query 37465 AATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAATAATATAAACACATCAGCCAAA 37524 | | ||||| || ||| |||| | | || | || || ||||| | | Sbjct 294284 AGCAAACGGGCTTCCTCAGAATCAAATGGCAAACGTAACAGCATGAAAGTGTCAGCGAGA 294225 Query 37525 CCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGATCTAGACGATTCTATCACT 37584 || |||||||| | | | || ||||||||| || |||| ||| | || |||| || Sbjct 294224 CCTTGAACACCCAAAGCAATTGGTCTATGTCTCATATTGGATTTTCTCGCTTCTTCAACA 294165 Query 37585 GGATAATAATTGATATCTATTATTTTATTTAGATT 37619 || || ||||| ||| || | | | |||| ||| Sbjct 294164 GGGTAGTAATTACGATCAATGACTCTGTTTAAATT 294130 >seq9 Length=431184 Score = 163 bits (180), Expect = 3e-35 Identities = 1074/1698 (63%), Gaps = 74/1698 (4%) Strand=Plus/Plus Query 36982 TTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAAATCT--- 37038 |||||||| || ||||| || ||||| |||| || || | | | ||| | || | Sbjct 225856 TTTTGAGAGATTTCCCAGACGGTTTTGTATAATTCCTTCAATTCTTGTGGCACATTTGGT 225915 Query 37039 AAATGTTGAATAGAACCATTATGTAACACAATTG--TATTCTTT-ATGTCATTATTCCAC 37095 || ||||||||||||||| ||| |||| |||| ||| || || || ||| Sbjct 225916 AAGCCTTGAATAGAACCATTTTGTGT---AATTAGATATTGTTTCATACTATCATCCCAA 225972 Query 37096 ATATTTCTACTT--ATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAG 37153 ||| | | | | || || | | || | |||||| ||||| || || || |||| Sbjct 225973 ATAC--CCAGGTCGACTAAATCACGTAGTAAATATGGATTAACAACTTGGAATTCACCAG 226030 Query 37154 ATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTA 37213 | | || | | | || || || || |||||| | | ||||||| || | Sbjct 226031 ACAGGACACGACGAGAGTACATGTTTGAGGTCACTGGTTCGAAACATTCATTATAACCAA 226090 Query 37214 ATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAG--AAGGCTATTTCTCAATCC 37271 ||||| || || || || || ||||||||||| || || || | ||||| || || Sbjct 226091 GAATTTGGGAAGTTGAGGCGGTTGGCATTGGTGCCAT-AGTCAAAGAG-TTTCTTAACCC 226148 Query 37272 ATGTGTATTAATTCTCTTTTTTA--GTTCATTCCAATCCCATAAATCTGTTGGGTT--CT 37327 |||| || ||| |||| ||| ||| | ||||||||| | | ||| || | Sbjct 226149 ATGTTTAACAATGTCCTTTCTTAAGGTT--TCCCAATCCCACATGCCAAATGGTTTAGCG 226206 Query 37328 TTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCAT 37387 || ||||||||| |||||| |||||| || ||||||||| | | | | || || Sbjct 226207 TT--CCACATATCGAATTGTAAAATACCCTTGGAAGCTGGAGAACCTTCAAAAGTAGAAT 226264 Query 37388 AAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTT 37447 | || | ||| || | ||| || | ||| || | |||| || || |||| Sbjct 226265 ATTTACCTTCTTTTTGGGCCAATTCACAGGAGGCTTCAAGAGTAGCATGGTAAATAGTTT 226324 Query 37448 CGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCC-CAATAAT 37506 |||| |||||| | |||| ||| |||||||| | || || | ||| | ||| | Sbjct 226325 CGAAGATTTGTTTGTTTAGAGTTTGAGCTTCTTC-CGATTCAAAGGGTAGACGCAACATC 226383 Query 37507 ATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGA- 37565 ||| | ||| ||||||||||| ||||| | | | || |||||||| ||| |||| || Sbjct 226384 ATATAAGTATCGGCCAAACCCTGGACACCAAGAGCAATAGGTCTATGCTTCATATTTGAA 226443 Query 37566 --TCTAGACGATTCTATCACTGGATAATAATTGATATCTATTATTTTATTTAGATTTTTA 37623 ||||| | || |||||||| ||||| || || | | | || | | || | Sbjct 226444 TTTCTAGCC---TCGGGAACTGGATAGTAATTACGGTCGATAACTCTGTTCA-AGTTGTG 226499 Query 37624 ACTAGT-ATTTTCGTAAT-TATTCTCAACTTGTCGAACATAAATACGTT--ATTATTAAC 37679 || | | ||| | ||| | | | | || ||||| || || || | | ||| | Sbjct 226500 GGTAATGACTTTAGCAATCTCGTGTAATCTC-TCGAAATTA--TAGCTTGCAGTTTTACC 226556 Query 37680 AAATTTA-----CTCAACGAA-------------ATAGATCCTAGATTACATACAGCAAC 37721 | || ||||||||| ||||| ||| |||||| || ||| Sbjct 226557 ATCTTCTGAAACCTCAACGAATGCTGGTAGGGCAATAGAAGCTAAATTACAAACTGCAGT 226616 Query 37722 TTCATCTTCGTTACTAAATTGTATAATCTCTGTACAGAGATTACTCGATCTAATTGTTCC 37781 |||||| | | ||| | || || ||| | ||| ||| | || || || Sbjct 226617 TTCATCCGGGGAGGAATATTCGACGATTTCACAACATAAGTTAGATGATTTGATAGTACC 226676 Query 37782 CAAATTGCTTTGATTGGATTTTTTATTACAAGAATCTTTATATAGTATATACGGCGTTCC 37841 || || ||| || | || | ||||| | || ||||| | || | || || || Sbjct 226677 TAAGTTCTGTTGGTTTGTCTTCCTGTTACATGCGTCCTTATAAACCATGAAAGGTGTACC 226736 Query 37842 TTGTTCTATTTGAGCCTCGATAATAGATTTCCATAAACTTCTTGCTTTAACGATCGCTTT 37901 | |||| | || || | | ||| | | ||| || || ||||||| | | ||| Sbjct 226737 TGTTTCTGTCTGTGCTTGCAAAATGGCATACCACAACTTTTGGGCTTTAA---TTGTTTT 226793 Query 37902 A--AtttttttCTTTGTTTCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATACA 37959 | | |||| | |||||| |||||| || | ||| |||| ||||| ||| Sbjct 226794 ACCACGACCTTCTCT--TTCGTAACGAGTATATAGTTCTTCAAATTCATCACCCCACACA 226851 Query 37960 TCGCATAATCCTGGA-CATTCGCA-TGGAC-ACATTAGAGACCATTCTTCATCTTTTTCT 38016 || ||| ||||| || ||| ||| | | | || || ||| |||| | || Sbjct 226852 TCATCTAAACCTGGGGCA---GCACTGGGCGAAAATAAAGTCCAAGGCCCATCCTCTTGA 226908 Query 38017 ACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATAT 38076 || |||| ||| || | |||||| | ||||| |||| || |||||| | | | | | Sbjct 226909 ACACGTTTCATGAAAAGATCAGGGATCCATAGAGCAGGGAACAAATCTCTTGCACGAATT 226968 Query 38077 TCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGT 38136 ||||| || || | ||||| | | ||| ||||| ||||| || |||||||| Sbjct 226969 TCTTCCTTACCATGTGTTTTTCTGATATCGACAAAGTCGAAGATATCTGCATGCCATGGC 227028 Query 38137 TCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACT 38196 || | ||| | | || || ||||| || | ||| ||||| | | ||| | | Sbjct 227029 TCCAAGAAAAGGGCGAAGGCACCAGGTCTCTTGTTACCACCCTGGTCCACATAACGGGCA 227088 Query 38197 GTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGAT 38256 || ||||| | | | | |||||| | | || || || | ||||| |||| | Sbjct 227089 GTATTATTGAAAACACGAATCATAGGAATCAACCCGTTTGAAGTACCGTTGGTACCAGCG 227148 Query 38257 ATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTT 38316 ||||||| ||| | | || || || | || | || | ||||||||| ||| Sbjct 227149 ATATAAGAACCTGTGGAACGGATGTTGTTGATATGAAGACCAACACCACCTGCAGTTTTG 227208 Query 38317 GATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATT 38376 || || | ||| |||| ||| || |||||| | |||||||| ||| ||||||||| || Sbjct 227209 GAAATCATAGCACATTCTTTCAAAGTATCATAAATACCTTCGATAGAGTCATCCTTCATG 227268 Query 38377 GGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGA 38436 | | || ||||| |||||||||||| ||| || || ||||| ||||| || || Sbjct 227269 GCAATTAAGAAACATGAAGACATTTGAGGATGTGGTGTACCAGCGTTGAATAAAGTTGGG 227328 Query 38437 GATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATA 38496 || || || |||| || || ||||| ||||||| || | | ||| || ||| Sbjct 227329 GAAGCGTGAGTGAAGTATCTTAACGACATCAAATTATAAGTCTTCAGCACAGATTCGATA 227388 Query 38497 TCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTCTATTATT 38556 || | || || |||||||| | || | ||||| || ||| || || | |||| | | Sbjct 227389 TCGCTACCATGGATACCTAGCGCCACACGCATTACCAAATGCTGAGGACGTTCTGCCACT 227448 Query 38557 TTATTATTCTGTTTAAGTAGATACGATTTTTCTAATGTTTTTATTCCAAAATAACTATA- 38615 | | ||| || | || | ||||| || | ||| || | ||| ||||| |||| Sbjct 227449 TCACCGTTCAGTCTTAGCAAGTACGAACGCTCCAGTGTCTTGAATCCGAAATACGTATAC 227508 Query 38616 TGAATAATCTCTATCGTA 38633 || | |||| |||||||| Sbjct 227509 TGGA-AATCCCTATCGTA 227525 >seq10 Length=725652 Score = 134 bits (148), Expect = 1e-26 Identities = 397/602 (66%), Gaps = 24/602 (4%) Strand=Plus/Minus Query 11621 AACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAA 11680 |||| || || ||||| || || |||||||||||||||| || | ||| || ||| Sbjct 393020 AACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAA 392961 Query 11681 AATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCA 11740 || ||||| |||||||||| |||| ||||| | ||| || || | ||||| ||||| Sbjct 392960 AAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCG 392901 Query 11741 GAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATATA---CCT-T 11796 || || || | || || | | ||||| || |||| |||||| ||| | | | | Sbjct 392900 GAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCA 392841 Query 11797 GTTGCTAGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCC----ATTG 11852 | || || |||||| || ||||| || || ||| | || ||| | || | Sbjct 392840 GCGTCTTGA-ATCCATCTTAAAGCCCATTCGGCCTTC----TCACCGATTTCTGGGATGG 392786 Query 11853 TTTCTATAGCGTTAAATA--AATGCATTTTTTCTATATTATCTCTTACATATGTATCTAT 11910 | | || || || || | ||| || ||||| || || | | || ||||| || Sbjct 392785 TGTGAATGGCATTGAACAAGAATTCA--CTTTCTTTAGGGTCCTTGATGTAGGTATCGAT 392728 Query 11911 TAATAAACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACA 11970 || || || |||| || ||||||||||| || ||||| || || ||||||| Sbjct 392727 CAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACT 392668 Query 11971 TCGTGCCTCTGAACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAAT 12030 |||||||| | || || || | || |||| | || || ||||| ||||| Sbjct 392667 CTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAAT 392608 Query 12031 ACCATCACTAGATGCAAAAAATGCTAGTA-TATGTTTTATAAAGTATTTTTCGTCTTTAG 12089 ||| ||| || || ||||| || || | | || || || || | |||| | | | Sbjct 392607 ACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTG-GAAATGAAAAATCTCTCGT-TCTCG 392550 Query 12090 TTAAT----TTATCCCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAA 12145 || || || | ||| |||| | ||| || || ||||| | ||||||| ||||||| Sbjct 392549 TTCATTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAG 392490 Query 12146 AAACTTGCCACTGATTGTTTATACATTTTCCAGATATCATGATACTTAATAGGGAAAATA 12205 ||| || | | | || || || |||||| ||||| ||||| |||||||||| | Sbjct 392489 AAAGAAGCTTCGGCACGCTTGTAGGCTTGCCAGATTTCATGGTACTTGATAGGGAAAAGA 392430 Query 12206 AC 12207 || Sbjct 392429 AC 392428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468524700438480