Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F002058645.1_202017-03- 21] 17 sequences; 11,964,015 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq12 122 2e-22 seq9 105 2e-17 seq11 95.1 3e-14 >seq12 Length=1043178 Score = 122 bits (134), Expect = 2e-22 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||||| || | ||| ||||| || |||||||||| ||||||||||| ||| || || Sbjct 68994 AGTCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTA 69053 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 |||||||| || ||||| || || || || | | ||| || |||||| ||| ||||| Sbjct 69054 CCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGAATACCTTCC 69113 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 || ||||| || ||| ||| || | ||||| | | ||| || || | || Sbjct 69114 TTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTT 69173 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || || || || ||||||||||| Sbjct 69174 ATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTG 69208 Score = 118 bits (130), Expect = 2e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| || | ||| ||||| || |||||||||| ||||||||||| ||| || || || Sbjct 69224 TCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACC 69283 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||||| |||||||| ||||| ||||| | | ||| || || ||| || ||||| Sbjct 69284 GTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTT 69343 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 ||||| || || ||| ||| |||| ||||| | | ||| || || || ||||| Sbjct 69344 GTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGAT 69403 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || | ||| || ||||| || || Sbjct 69404 GGTTTTACCGGTCAAAGTCTTAACAAAGATCTG 69436 Score = 116 bits (128), Expect = 9e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 199415 CTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCA 199474 |||| ||| ||||| ||||| ||||||||||| | |||||||| | || || || ||| Sbjct 68769 CTCAAGACGAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCA 68828 Query 199475 TCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGC 199534 ||||| || || || ||||| ||||| | | |||||||| ||| ||| ||||| Sbjct 68829 TCTTCTAGTTGTTTACCGGCAAAGATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTG 68888 Query 199535 TCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATC 199594 || ||||| ||| ||| ||| || | ||||| | | ||| || || | || || Sbjct 68889 TCTTGAATTTTTGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATA 68948 Query 199595 GTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || || || || || |||||||| Sbjct 68949 GTCTTACCTGTCAGTGTCTTGACGAAAATTTG 68980 Score = 86.0 bits (94), Expect = 1e-11 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 200930 AAAAACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989 ||| | | ||||| || || ||||| ||||||||||| || |||||| |||| |||||| Sbjct 476516 AAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAACA 476575 Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 201024 |||| || || |||||||| ||| | || |||||| Sbjct 476576 TCCAAAAGGAATCTACTCTACACTTGGTCTTGAGA 476610 >seq9 Length=431184 Score = 105 bits (116), Expect = 2e-17 Identities = 148/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| ||| | ||| | ||| || || ||||| | ||||||||||| ||| || || || Sbjct 62022 TCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACC 61963 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||||||| ||||| || || ||||| | | || ||||| || || ||||| Sbjct 61962 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 61903 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || ||||||||| ||| || || | ||||| | | ||| || ||||| ||||| Sbjct 61902 GTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 61843 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAA 199621 |||||||| || | ||| || |||||| Sbjct 61842 GGTCTTACCAGTCAAAGTCTTGACAAAA 61815 >seq11 Length=692235 Score = 95.1 bits (104), Expect = 3e-14 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| ||| | || | ||| || |||||||||| ||||||||||| | ||| || || Sbjct 640756 TCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACC 640815 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||||||| ||||| || || ||||| | | || ||||| || || ||||| Sbjct 640816 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 640875 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || || ||||| ||| || || | |||||| | | ||| || ||||| ||||| Sbjct 640876 GTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 640935 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAA 199620 |||||||| || | ||| || || || Sbjct 640936 GGTCTTACCAGTCAAAGTCTTAACGAA 640962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178921343216139