Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F002058645.1_202017-03- 21] 17 sequences; 11,964,015 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq13 145 9e-30 >seq13 Length=903361 Score = 145 bits (160), Expect = 9e-30 Identities = 337/504 (67%), Gaps = 12/504 (2%) Strand=Plus/Plus Query 159277 ATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTATGCA 159336 || ||||| || ||| ||| || |||||||| || |||| | || ||||| ||| | Sbjct 612737 ATTACAGGTTTCGATGGTATTTCTTTACAACCAAATTCAGGTGCTCAAGGTGAATATACT 612796 Query 159337 GGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAAAGAAATGTATGT 159396 || ||| || |||| | | |||| || | ||| || || | | || || ||| Sbjct 612797 GGTCTGAGAGTAATCAGATCCTACCTGGAAAGCAAAGGTGAAAATCATCGTAACGTGTGT 612856 Query 159397 TTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAA 159456 || || || | || || ||||| || ||||| || || || | ||||| || | ||| Sbjct 612857 TTAATCCCTGTATCCGCTCATGGTACAAATCCGGCTTCTGCCGCTATGGCGGGTTTAAAA 612916 Query 159457 GTTGTAGGTGTCAAGTGTGATGATGATGGCAACATAGACATCAAAGATCTAGAGAAGAAA 159516 ||||| |||||| ||| | |||||| |||| | || || |||| || Sbjct 612917 GTTGTTCCTGTCAACTGTTTGCAGGATGGCTCATTAGATCTGGTTGACTTAAAGAATAAG 612976 Query 159517 GCAATCATGAATA-CATTT----GAACTGTCATGTATTATGATTACATATCCATCTACAC 159571 || |||| | |||| ||||| | | ||||| || ||||| ||||| Sbjct 612977 GC-----TGAACAACATTCTAAAGAACTAGCCGCCGTAATGATCACCTATCCTTCTACTT 613031 Query 159572 ATGGTGTATTTGAAACAAACATCAGACA-GATATGTAAGATTGTTCATGAGAATGGTGGT 159630 | ||| |||||||| || |||| ||| | ||| | | || || ||| |||||| Sbjct 613032 ACGGTTTATTTGAACCAGGCATCCAACATGCTAT-TGATATCGTACATTCTTTTGGTGGA 613090 Query 159631 CAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCATGTGAC 159690 || || ||| | |||||||| ||| | ||||| ||||| || ||| | ||| | || Sbjct 613091 CAAGTCTATTTGGATGGTGCTAATATGAATGCGCAGGTTGGGCTAACTTCACCCGGAGAT 613150 Query 159691 TATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGT 159750 |||||||||||| || || | || |||||||||||||| | ||||| ||||| ||| Sbjct 613151 CTTGGTGCAGATGTTTGCCACTTGAATTTACATAAGACATTTTCCATTCCTCATGGTGGT 613210 Query 159751 GGAGGTCCTGGCGTAGGTCCTATT 159774 || ||||| | | || ||| ||| Sbjct 613211 GGTGGTCCAGCTGGAGCTCCCATT 613234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588051075039120