Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F002079025.1_202017-03-
21] 17 sequences; 12,039,134 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq12 104 2e-17
seq9 84.2 2e-11
>seq12
Length=1035507
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | ||| || || || | | || |||||||| ||||||||||| |
Sbjct 55650 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 55709
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || | ||| || || || ||||||| | |||| | | |||||| || |||||
Sbjct 55710 AAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGG 55769
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|||||||| ||||| |||||| || | | || | ||||||| || || |||
Sbjct 55770 ATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACC 55829
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | |||||||| |||| ||| || ||||| ||||||||
Sbjct 55830 TCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 55876
Score = 100 bits (110), Expect = 3e-16
Identities = 148/206 (72%), Gaps = 4/206 (2%)
Strand=Plus/Plus
Query 138411 ATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTG 138470
||||| | | |||||||| ||||||||||| || || || | ||| || || ||
Sbjct 55901 ATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTGCCGTCTTCTAGCTG 55960
Query 138471 TTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTT 138530
||||||| | |||| | | ||||| || ||||| |||||||| ||||| ||| |||
Sbjct 55961 CTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTC-TTGAATTT 56019
Query 138531 TTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCA 138588
| | |||| ||| || | ||| |||| || || || || | || | ||||||||
Sbjct 56020 TCGACTTAACGTTG-TCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCG 56078
Query 138589 GTCAGAGTTTTTACAAAAATCTGCAT 138614
|||| ||| || || |||||||||||
Sbjct 56079 GTCAAAGTCTTGACGAAAATCTGCAT 56104
Score = 96.9 bits (106), Expect = 3e-15
Identities = 141/196 (72%), Gaps = 4/196 (2%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||||||||| |||||||| || || | || || ||||||||||||| |
Sbjct 54999 GACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGTTTACCGGCA 55058
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539
|||| | | || ||||| ||||| |||||||| ||||| ||| |||| | ||||
Sbjct 55059 AAGATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTC-TTGAATTTTCGACTTAAC 55117
Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598
||| || | ||||| | || || ||||| | || | || ||||| ||||| || |
Sbjct 55118 GTTG-TCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCT 55176
Query 138599 TTACAAAAATCTGCAT 138614
| || ||||| |||||
Sbjct 55177 TGACGAAAATTTGCAT 55192
Score = 93.3 bits (102), Expect = 4e-14
Identities = 160/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | ||| || | || | | || |||||||| ||||||||||| |
Sbjct 55194 CCACCTCTCAATCTCAACACCAGGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 55253
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || | || || ||||| ||||| | | | || | | |||||| ||||||||
Sbjct 55254 AAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGG 55313
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565
||||||||||| || ||| |||| |||| | ||| || | ||||||| || || |
Sbjct 55314 ATACCTTCTTTATC-TTGAATTTTACTTTTGACGTTG-TCAATAGTGTCGGAAGATTCAA 55371
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||| | || | || || || || |||||||| || ||||| |||||
Sbjct 55372 CCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 55420
>seq9
Length=443501
Score = 84.2 bits (92), Expect = 2e-11
Identities = 312/484 (64%), Gaps = 14/484 (3%)
Strand=Plus/Plus
Query 153087 GGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCC 153146
||||| || |||| |||| || || ||||| | || | ||||| ||||| |||
Sbjct 226570 GGTTCGAAACATTCATTATAACCAAGAATTTGGGAAGTTGAGGCGGTTGGCATTGGTGCC 226629
Query 153147 ACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAATCC 153206
| |||||| || | || ||||| |||||| | | || | | ||| |||
Sbjct 226630 ATAGTCAAAGAGTTTCTTAACCCGTGTTTAACAATGTCCTTTCTTAAGGTTTCCCAGTCC 226689
Query 153207 CACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGT--AACACTCCTCGACTGGCGG 153264
|||| | | ||| | ||||||||||| ||| | ||| || || | | || || |
Sbjct 226690 CACATGCCAAATGGTTTAGCGTTCCACATATCGAATTGTAAAATACCCTTGGA--AGCTG 226747
Query 153265 GACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAGCCTCGA 153324
|| || |||| ||| || | || || |||||||| ||| ||| || || |
Sbjct 226748 GAGAACCTTCAAAAGTAGAATATTTACCTTCTTTTTGGGCCAATTCACAGGAGGCTTCAA 226807
Query 153325 GCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCTCT 153384
| | ||| ||| || |||||| ||||||||| || ||| |||||||| |
Sbjct 226808 GAGTAGCATGGTAAATAGTTTCGAAGATTTGTTTGTTTAGAGTTTGAGCTTCTTCTGATT 226867
Query 153385 CGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATGG 153444
| | || | |||| || || | | | ||||||| |||||||| ||| | | || |
Sbjct 226868 CAAAGGGTAGACGCAACATCATATAAGTATCGGCCAAACCCTGGACACCAAGAGCAATAG 226927
Query 153445 GTCGATGCTTC-TCGTTG--CTGC--GCCTCGCGCTCGCTATGGGATAGTGATTGCGATC 153499
||| ||||||| | ||| | | |||||| | | ||||||| ||| || ||
Sbjct 226928 GTCTATGCTTCATATTTGAATTTCTAGCCTCG-----GGAACTGGATAGTAATTACGGTC 226982
Query 153500 GATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATC 153559
||||| | |||| | |||| | | ||||||| ||| | | | | |||||||||
Sbjct 226983 GATAACTCTGTTCAAGTTGTGGGTAATGACTTTAGCAATCTCGTGTAATCTCTCGAAATT 227042
Query 153560 ATAG 153563
||||
Sbjct 227043 ATAG 227046
Score = 82.4 bits (90), Expect = 8e-11
Identities = 153/221 (69%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | ||| ||||| || | | || || ||||||||||||||||| |
Sbjct 63223 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 63164
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || | ||| || | ||| ||||| | | |||| | | |||||||| || ||
Sbjct 63163 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 63104
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565
|||||||| ||||| ||| | |||| || |||| || | ||||| | || || |
Sbjct 63103 ATACCTTCCTTGTC-TTGAATCTTTGACTTGACATTG-TCAATAGTGTCAGAAGATTCAA 63046
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAA 138606
| || | || | || |||||||||| ||| || ||||||
Sbjct 63045 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 63005
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496262294544240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |