Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F002079025.1_202017-03- 21] 17 sequences; 12,039,134 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq5 268 1e-66 seq9 159 4e-34 >seq5 Length=572248 Score = 268 bits (296), Expect = 1e-66 Identities = 893/1372 (65%), Gaps = 42/1372 (3%) Strand=Plus/Minus Query 105953 GGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCC 106012 ||||| || |||||||||| |||||| ||||| | ||||| || || |||||||||||| Sbjct 303244 GGTTCGAAACATTCATTATAACCCAATATTTGGGATGTGGATGCAGTAGGCATTGGTGCC 303185 Query 106013 ATCA--AAAGACTGTTACGAAGACCCTTTTCCTTGATG-CGTTCCTTGAGAACATCCCAG 106069 || || || | | | || ||| | | | |||| | || ||| || ||||| Sbjct 303184 ATGGTCAAGGAATTT--CTAATACCATGCTTCATGATATCTTTTCTTAAGGTG-TCCCAA 303128 Query 106070 TCGTAGTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTG 106129 || | || | || || |||||||||||||| || || | ||||| || | Sbjct 303127 TCCCACATGCCGTAGGGTTTTTGGTCCCACATATCAAACTGTAGTATACCTTGAGAAGCA 303068 Query 106130 GGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTC--AGCCAATTCACAGCTCGCCT 106187 ||||| || | || || || || | ||| | |||| ||| | |||||| || | Sbjct 303067 GGAGATCCTTGGAAAGTTTCGTATGGACCGTC--CTTCTGAGCTAGTTCACAAGAAGCTT 303010 Query 106188 CCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTG 106247 ||| ||| || ||||| || ||||||||||| | ||| | | |||||| || | Sbjct 303009 CCATGGAGGCATGATAAATAGTTTCAAAGATTTGGATATTTAGCAAACGGGCTTCCTCAG 302950 Query 106248 AATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAA 106307 ||||||||| | || ||| || || || ||||||||||||||||||||| ||| Sbjct 302949 AATCAAATGGCAAACGTAACAGCATGAAAGTGTCAGCGAGACCTTGAACACCCAAAGCAA 302890 Query 106308 TAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAA 106367 | ||||| |||| |||||| || |||| ||| ||||| || || |||| | |||| Sbjct 302889 TTGGTCTATGTCTCATATTGGATTTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAA 302830 Query 106368 TGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAA 106427 |||||| ||||| ||| ||||||| || | |||||||| | ||||| | | Sbjct 302829 TGACTCTGTTTAAATTACGAGTAACAACTTTAGCAATTTCATGTAATTTTTTGAAGTTGT 302770 Query 106428 AAGTGCGAGTCT---------------CTTCATTGACATACTTTGGAAGGGCGATTGATG 106472 | ||| ||||| |||| ||| || | ||| | ||| | || | Sbjct 302769 ATGTGGAAGTCTTACCATCCTCAGAAGTTTCAATGA-ATGC--TGGTAAGGCAACGGAAG 302713 Query 106473 CCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGT 106532 |||| || |||||||| || ||||| | ||| ||| || | |||||| || |||| Sbjct 302712 CCAAGTTACAAACAGCTGTTTCATCTGGAGCTGAGTATTCAACAATTTCACAGCATAAGT 302653 Query 106533 TGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGT 106592 | || ||| || || || || ||||| ||| ||| |||| || |||||||||| Sbjct 302652 TTGATGACTTGATGACACCTAAGTTTTTTTGATTAGATTTTCTGTTACAAGCATCCTTGT 302593 Query 106593 AGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACATCGG 106652 | | | | | || || || || || || || | | | ||| | | ||| | || Sbjct 302592 AAACAACGAAAGGTGTACCAGTTTCAGTTTGAGCTTCCAAAATGGAATACCATA-ATTTT 302534 Query 106653 CGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAA 106712 || | | || | || | || || || |||||| || || || || |||| Sbjct 302533 TGG--GCTTTGATAGTCTTACCACGACCTTCTTTCTCGTAGCGGGTATATAGAGCCTCAA 302476 Query 106713 ACTCCTCACCCACCGCGTCGGAGAGACCTGGTGC-CTTGTCTGGACAGAAAAGAGACCAT 106771 |||| ||||| ||| | ||| || || ||| |||| |||| | | ||| Sbjct 302475 ACTCGTCACCGTAACAATCGCTTAAACCAGGAGCTGATGT-TGGAGAGAATAATGTCCAG 302417 Query 106772 TGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGA 106831 ||| || || || |||||||||||||| || |||||||| || | | || | | Sbjct 302416 GTCCCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAA 302357 Query 106832 TCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA-CTCAAGGAACTCCATGAT 106890 ||||| ||| || || | ||| ||||| || ||| |||| || || | ||| Sbjct 302356 TCTCTTGCACGAATTTCCTCTTTACCGTGGTT-CTTCCTAATATCAATAAAATCAAAGAT 302298 Query 106891 ATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTT 106946 ||| || |||||||| || || || | || | | || |||| | ||| | | Sbjct 302297 ATCAGCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTT-TATTACCACCCT 302239 Query 106947 GATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATT 107006 | | ||||| || || ||| || || || |||| ||| ||||| | ||| | || Sbjct 302238 GGTCAACATAACGGGCGGTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAG 302179 Query 107007 GACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAA 107066 ||| ||||| || ||| ||| | | | | | | |||||| || | |||| Sbjct 302178 TACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAA 302119 Query 107067 TACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGA 107126 |||| ||||| || || || ||||| ||| | | || | || || || | || Sbjct 302118 TACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGA 302059 Query 107127 TTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAG 107186 | ||||||||||| |||| | | ||| ||| |||||| || ||| |||| ||||| | Sbjct 302058 TAGAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGG 301999 Query 107187 CATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT-GGGACATCTTGTCGTATGTC 107245 ||||||| | ||||| | |||||| | || ||| || | |||||| || || || Sbjct 301998 CATTGAACAACGTTGGAGAGGCGTGAGT-AAAATATTTTAGAGACATCAAGTTATACGTT 301940 Query 107246 TCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAA 107297 || || ||| || || ||| ||||||||||| | || || | ||||| Sbjct 301939 TCTAAAGCAGCCTCGATATCTCTACCGTGGATGCCTAGTGCGACTCTCATAA 301888 >seq9 Length=443501 Score = 159 bits (176), Expect = 4e-34 Identities = 872/1371 (64%), Gaps = 44/1371 (3%) Strand=Plus/Plus Query 105953 GGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCC 106012 ||||| || |||||||||| ||| | ||||| | || ||||| ||||||||||||||| Sbjct 226570 GGTTCGAAACATTCATTATAACCAAGAATTTGGGAAGTTGAGGCGGTTGGCATTGGTGCC 226629 Query 106013 ATCA--AAAGACTGTTACGAAGACCCTTTTCCTTGATG-CGTTCCTTGAGAACATCCCAG 106069 || ||||| ||| | | || | || ||| | || ||| || |||||| Sbjct 226630 ATAGTCAAAGA--GTTTCTTAACCCGTGTTTAACAATGTCCTTTCTTAAGGTT-TCCCAG 226686 Query 106070 TCGTAGTTGAGCT-TGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGT 106128 || | || |||||| | |||| ||||||| ||||| | | || | ||| | Sbjct 226687 TCCCACATGCCAAATGGTTTAGCGTTCC-ACATATCGAATTGTAAAATACCCTTGGAAGC 226745 Query 106129 GGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTC 106188 |||||||| ||||| || ||| ||||| || |||||||||||| || || Sbjct 226746 TGGAGAACCTTCAAAAGTAGAATATTTACCTTCTTTTTGGGCCAATTCACAGGAGGCTTC 226805 Query 106189 CAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGA 106248 || | || || || || ||||| ||||| | || | | ||||| ||||| Sbjct 226806 AAGAGTAGCATGGTAAATAGTTTCGAAGATTTGTTTGTTTAGAGTTTGAGCTTCTTCTGA 226865 Query 106249 ATCAAATGCGTAG-CGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAA 106307 ||||| | |||| || ||| ||| | ||| || | ||| || ||||| | | ||| Sbjct 226866 TTCAAA-GGGTAGACGCAACATCATATAAGTATCGGCCAAACCCTGGACACCAAGAGCAA 226924 Query 106308 TAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC---AACGGGATAAAAATTTCTGT 106364 ||||||| || |||||| || |||| || ||| ||| ||||| |||| | || Sbjct 226925 TAGGTCTATGCTTCATATTTGAATTTC---TAGCCTCGGGAACTGGATAGTAATTACGGT 226981 Query 106365 CAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAAT 106424 | || |||| ||| | || | ||||| | || | || || || | | | || ||| Sbjct 226982 CGATAACTCTGTTCAAGTTGTGGGTAATGACTTTAGCAATCTCGTGTAATCTCTCGAAAT 227041 Query 106425 CAAA------AGTGCGAGTCTCTT------CATTGACATACTTTGGAAGGGCGATTGATG 106472 | | ||| | |||| | | || | || ||||| || || | Sbjct 227042 TATAGCTTGCAGTTTTACCATCTTCTGAAACCTCAACGAATGCCGGTAGGGCAATAGAAG 227101 Query 106473 CCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGT 106532 | ||||| ||||| || || |||||| | || || | ||||| ||| |||| Sbjct 227102 CTAAATTACAAACTGCAGTTTCATCCGGGGAGGAATATTCGACGATTTCACAACATAAGT 227161 Query 106533 TGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGT 106592 | || || || || || || |||| |||||| |||| |||| || || ||||| | Sbjct 227162 TAGATGATTTGATAGTACCTAAGTTCTGTTGGTTTGTCTTCCTGTTACATGCGTCCTTAT 227221 Query 106593 AGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTG-AGAATTGCCTTCCACACATCG 106651 | | |||| | || || || || || ||||||| |||| | ||| || | ||||| | Sbjct 227222 AAACCATGAAAGGTGTACCTGTTTCTGTCTGTG-CTTGCAAAATGGCATACCACAACTTT 227280 Query 106652 GCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCA 106711 ||| | ||| | || | || || || ||||| || || || ||||| Sbjct 227281 TGGGC---TTTAATTGTTTTACCACGACCTTCTCTTTCGTAACGAGTATATAGTTCTTCA 227337 Query 106712 AACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGAC-AGAAAAGAGACCA 106770 || || |||||| | | || | |||||| | | |||| | | || | || ||| Sbjct 227338 AATTCATCACCCCACACATCATCTAAACCTGG-GGCAGCACTGGGCGAAAACAAAGTCCA 227396 Query 106771 TTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAG 106830 | ||| |||| | ||| || ||||||||||| || || ||||| || | | || | Sbjct 227397 AGGCCCATCCTCTTGAACACGTTTCATGAAAAGATCAGGGATCCATAGAGCAGGGAACAA 227456 Query 106831 ATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGAT 106890 |||||| ||| ||||| | ||| || | || | || | || || | ||| Sbjct 227457 ATCTCTTGCACGAATTTCTTCCTTACCATGTGTTTTTCTGATATCGACAAAGTCGAAGAT 227516 Query 106891 ATCCGCGTGCCATGGCT-CAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCT 106945 ||| || |||||||||| ||||| | | |||| || || || | | ||| | Sbjct 227517 ATCTGCATGCCATGGCTCCAAGA-AAAGGGCGAAAGCACCAGGTCTCTTG-TTACCACCC 227574 Query 106946 TGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGAT 107005 || | ||||| || || || || || || |||| ||| ||||| | || | ||| Sbjct 227575 TGGTCCACATAACGGGCAGTATTATTGAAAACACGAATCATAGGAATCAACCCGTTTGAA 227634 Query 107006 TGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCA 107065 ||| || || || ||| ||| ||| | | | | ||| || | ||| Sbjct 227635 GTACCGTTGGTACCAGCGATATAAGAACCTGTGGAACGGATGTTGTTGATATGAAGACCA 227694 Query 107066 ATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTG 107125 | ||| || || || || || ||||| || | | ||| |||| ||||| | | Sbjct 227695 ACACCACCTGCAGTTTTGGAAATCATAGCACATTCTTTCAAAGTATCATAAATACCTTCG 227754 Query 107126 ATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCA 107185 || ||||| ||||| |||| || | ||| || ||||| || || ||| |||||| Sbjct 227755 ATAGAGTCATCCTTCATGGCAATTAAGAAACATGAAGACATTTGAGGATGTGGCGTACCA 227814 Query 107186 GCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT-GGGACATCTTGTCGTATGT 107244 || ||||| | ||||| | |||||| |||| || ||| |||||| | || || Sbjct 227815 GCGTTGAATAAAGTTGGGGAAGCGTGAGTGAA-GTATCTTAACGACATCAAATTATAAGT 227873 Query 107245 CTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCAT 107295 || || ||||| || || || || ||||| || | ||||||||||| Sbjct 227874 CTTCAGTACAGATTCGATATCGCTACCATGGATACCTAGCGCCACACGCAT 227924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980674629080