Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F002214855.1_202017-07- 05] 55 sequences; 11,944,230 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq5 127 2e-24 seq9 104 3e-17 >seq5 Length=789524 Score = 127 bits (140), Expect = 2e-24 Identities = 387/589 (66%), Gaps = 28/589 (5%) Strand=Plus/Minus Query 164398 AATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGACGA 164457 || |||||||| |||| || ||||| | ||| ||| ||| || ||||||||| || Sbjct 375782 AAGTTTGAAGATTTGGGTGTCGGTGGTTTGGATAAAGAGTTTACTAAAATTTTCAGAAGA 375723 Query 164458 GCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAACATATA 164517 || ||||| | || ||||| | | ||| ||||| | || | ||| | Sbjct 375722 GCGTTTGCAAGTCGAATCTTTCCTCCTTCAGTTATAGAAAAACTGGGTATTTCTCATGTT 375663 Query 164518 AAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGCATT 164577 ||||| | |||| | || ||||| ||| ||||| || ||||| || || ||| Sbjct 375662 AAAGGTTTGCTATTGTACGGTCCTCCAGGTACTGGTAAGACCTTAATTGCAAGAAAGATT 375603 Query 164578 GCT-CAAGCTTTTAAATCGC----GACCCGTTAAAATTGTTAATGGTCCTGAATTATTGA 164632 | | ||| | | ||| || || || ||||| || |||||||| ||| | |||| Sbjct 375602 GGTACAA--TGCTGAAT-GCTAAAGAGCCC--AAAATCGTCAATGGTCCAGAAATTTTGA 375548 Query 164633 ACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGAAG 164692 || || || ||| ||||||| || || | || || ||| |||| || |||| || Sbjct 375547 GTAAGTACGTTGGTTCTTCAGAAGAAAACATTCGTAATTTATTTAAGGATGCAGAAGCAG 375488 Query 164693 AACAAAAGAAAGC--AGGTTTAGCTAG-TAAATTACATGTTATTGTTTTTGATGAGATAG 164749 || | | | || ||| | || | | |||||| ||||| |||| |||||| | | Sbjct 375487 AATATAGG---GCCAAGGGTGAGGAATCTTCCTTACATATTATTATTTTCGATGAGCTGG 375431 Query 164750 ATGCTCTTTGCAAAAAACGTGGT------GATAATATTATTCATGATG----CAGTG--G 164797 || || ||| ||| | | ||| | | || || | || | || || | Sbjct 375430 ATTCTGTTTTCAAGCAGAGAGGTTCAAGAGGTGATGGTACTGGTGTAGGGGACAATGTAG 375371 Query 164798 TTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATTGTAG 164857 ||||||| ||| | ||||||| |||||||| || || ||||||||||| || | | Sbjct 375370 TTAATCAATTGTTAGCTAAAATGGATGGTGTTGATCAATTGAATAATATTTTGGTTATTG 375311 Query 164858 GTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGAAT 164917 |||||||||| || |||||||| || |||| | || || || ||| |||| ||| Sbjct 375310 GTATGACCAATCGTAAAGATTTAATAGACAGTGCTCTTTTGCGTCCAGGTAGATTTGAAG 375251 Query 164918 TGAAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTT 164966 | || | ||||| |||||||| || ||||| | || |||||||| Sbjct 375250 TCCAAGTTGAAATTCATTTACCCGATGAAAAAGGAAGACTCCAAATTTT 375202 >seq9 Length=592500 Score = 104 bits (114), Expect = 3e-17 Identities = 367/571 (64%), Gaps = 43/571 (8%) Strand=Plus/Minus Query 6699 TGGATGAGGATTATAATCTAACAATTCAAAATCTTCAAATTTAAAATCACATAAAT-TAT 6757 ||||||||||||||||||| | |||||| ||| || || |||||| | ||| | | Sbjct 142928 TGGATGAGGATTATAATCTTCAATTTCAAAGTCTGTTAACTTGAAATCA--TCAATGTCT 142871 Query 6758 CAGACtttttttttAATATTACAACAGGTGAA-GGTTTT--ATTGATCGAGTTAATTGTT 6814 || | ||||||| || | ||| ||| || ||| || || | ||||| Sbjct 142870 TTAACGTCCCTTTTAATCTTTAGTTTCGGGAATGGTCTTGGATT--TCTGGTGATTTGTT 142813 Query 6815 CTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAATAAATT 6874 |||| | || | || || ||| ||||| ||| ||||| || | |||||||| || | Sbjct 142812 CTTTCAAGGCATCAATGTGGTCTTTATAAACATGTGCATCCCCCAAAGTATGAATGAACT 142753 Query 6875 CACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGAAGCTA 6934 ||||||| | ||| || ||| ||| |||||| | || || || ||||| || || | Sbjct 142752 CACCTGGCTCCATGTCGACAACTTTAGCAATCATTCTAGTCAACAAAGCATATGATGCAA 142693 Query 6935 CATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTGATAACATTGACAAG-ATAAA 6993 ||||| ||||| || || |||||||| || | ||| || || ||| || || Sbjct 142692 TGTTAAATGGTACTCCCAACCCCATATCACAAGAACGTTGGTACAAT----AAGCATGAA 142637 Query 6994 A---------TATTG------------TCTATAG---------CATAAAATTGACACAAT 7023 | || | ||| | | |||| || || | || Sbjct 142636 AGGCGGGGCTTACCGGATCCTTCTCCTTCTTTGGGGAAACTGACATAGAACTGTGAAAAA 142577 Query 7024 ACATGACATGGAGGTAAAACAGCCTGATCTATATCAGATGGATTCCAAGCAGTCATTAAA 7083 | ||| ||||| || ||| | | || | ||||| ||| ||||| ||| |||| | Sbjct 142576 ATATGGCATGGCGGCAAAGCCATTTTGTCAAAATCAGCTGGGTTCCAGGCACTCATAATG 142517 Query 7084 ATACGTCTATCATTTGGATTTGTTTTTAATTTTGTTATAATTATTTGTAATTGATCTATA 7143 || | |||||| | |||||||| |||| ||| |||| || |||||||| ||| Sbjct 142516 ATTCTTCTATCGTAGGGATTTGTCTTTAGTTTATGAATAACCTGTTTCAATTGATCAATA 142457 Query 7144 CCCTGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCCATTGA 7203 || || || ||| | || || | | || ||||| |||||||| ||||||||| Sbjct 142456 CCTTGTCCAGTATAGTCGTCATCGCACGTCTTGTATTTAGCACCAAAATGCCTCCATTGA 142397 Query 7204 AACCCATAAATAGGACCTAAATCACCTTCTT 7234 || ||||||| || || | ||| ||| ||| Sbjct 142396 AATCCATAAACGGGCCCCAGATCTCCTACTT 142366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595871590338000