Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F002214855.1_202017-07- 05] 55 sequences; 11,944,230 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq10 181 3e-40 seq13 147 6e-30 seq4 131 5e-25 seq1 102 2e-16 >seq10 Length=572947 Score = 181 bits (200), Expect = 3e-40 Identities = 482/732 (66%), Gaps = 12/732 (2%) Strand=Plus/Plus Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689 |||||| ||||| |||||||| | ||| || ||||||| ||||| || || || || Sbjct 272534 GTATTCAACAATTTCACAGCATAAGTTTGATGACTTGATGACACCTAAGTTTTTTTGATT 272593 Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749 |||||| |||||||||||||||||||| | || | | || || || || || | || || Sbjct 272594 AGATTTTCTGTTACAAGCATCCTTGTAAACAACGAAAGGTGTACCAGTTTCAGTTTGAGC 272653 Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTG--CCTTCC 155807 |||| ||| ||| | | |||| |||| | || || | ||||| Sbjct 272654 TTCCAAAATGGAATACCATAATTTTTGGGC-----TTTGATAGTCTTACCACGACCTTCT 272708 Query 155808 GACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGG- 155866 ||| || |||| || | | || |||||||||||||| || | ||||| Sbjct 272709 TTCTCGTAGCGGGTATATAGAGCCTCAAACTCGTCACCGTAACAATCGCTTAAACCAGGA 272768 Query 155867 GCACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATAC 155926 || | | || | | || | | ||| | ||| | ||||||| ||| || | Sbjct 272769 GCTGATGTTGGAG-AGAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAG 272827 Query 155927 ATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATT 155986 |||| ||| | |||| ||| | || ||||| ||||| | ||||| || Sbjct 272828 ATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTT 272887 Query 155987 CTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAA 156046 ||||| | || | || || ||||||| ||| ||| ||||| || | ||||| Sbjct 272888 CTTCCTAATATCAATAAAATCAAATATATCAGCATGCCATGGTTCCAGGTAAAGGGCAAA 272947 Query 156047 ACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACC 156103 |||| || || |||||||| || ||||| || ||||| |||||||| |||| Sbjct 272948 CGCACCAGGTCTTTTATTACCACCCTGGTCAACATAACGGGCAGTGTTATTGAAAACACG 273007 Query 156104 TAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGA 156163 | ||||||||| | ||| || ||||| || || || || ||| | ||||||| ||| Sbjct 273008 AATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGA 273067 Query 156164 GCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTC 156223 |||| ||||| |||||||| ||||||||||| | ||| ||||| ||| ||||| Sbjct 273068 ACGAATGTTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTC 273127 Query 156224 CTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGA 156283 ||| | || | | |||| || || ||||| || || | ||| | | | | || || Sbjct 273128 CTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGA 273187 Query 156284 ACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATA 156343 | ||||||| ||| || || || ||||| | || || | || ||| ||||||| Sbjct 273188 GGACATTTGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTGAGTAAAATA 273247 Query 156344 CTTATTAGACAT 156355 || |||||| Sbjct 273248 TTTTAGAGACAT 273259 >seq13 Length=412412 Score = 147 bits (162), Expect = 6e-30 Identities = 240/341 (70%), Gaps = 6/341 (2%) Strand=Plus/Plus Query 156012 ATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCC 156068 ||||| | ||| |||||||| | | || ||| |||| |||||| |||||| Sbjct 215656 ATATCTGCATGCCATGGCTCCAAGAAAAGGGCGAAAGCACCAGGTCTCTTGTTACCACCC 215715 Query 156069 TGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAA 156128 || || ||||| || ||||| |||||||| |||| | ||||||||| | || || ||| Sbjct 215716 TGGTCCACATAACGGGCAGTATTATTGAAAACACGAATCATAGGAATCAACCCGTTTGAA 215775 Query 156129 GTGCCATTGGTTCC-GCGAATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCC 156187 || || ||||| || |||| ||| ||||| | || || | || | ||||| || || Sbjct 215776 GTACCGTTGGTACCAGCGA-TATAAGAACCTGTGGAACGGATGTTGTTGATATGAAGACC 215834 Query 156188 AATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTC 156247 || |||||||| ||| ||||| ||| ||||| || | ||||| |||||||||| Sbjct 215835 AACACCACCTGCAGTTTTGGAAATCATAGCACATTCTTTCAAAGTATCATAAATACCTTC 215894 Query 156248 AATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCC 156307 ||||| ||||| | ||| | | || | || ||| | |||||| |||| || || Sbjct 215895 GATAGAGTCATCCTTCATGGCAATTAAGAAACATGAAGACATTTGAGGATGTGGCGTACC 215954 Query 156308 AGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATA-CTTA 156347 ||||||||||| || || | || ||| | || || |||| Sbjct 215955 AGCGTTGAATAAAGTTGGGGAAGCGTGAGTGAAGTATCTTA 215995 >seq4 Length=895084 Score = 131 bits (144), Expect = 5e-25 Identities = 256/378 (68%), Gaps = 3/378 (1%) Strand=Plus/Plus Query 288849 CCTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGC 288908 ||| ||||| ||||||| | ||||||| || | ||||||| ||| || || | Sbjct 403556 CCTGTCAAATCTACCAGGCCTTAATAATGCTTTATCGAGAATATCGGGTCTATTGGTACC 403615 Query 288909 TGCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATT 288968 || || ||||||| || | | | | || |||||||| | ||| |||||||| Sbjct 403616 AGCTAAAACAACAACGTGGTCAGCTGGAGTGAAACCATCCATTTCTACTAACATTTGATT 403675 Query 288969 AAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCttttttt 289028 || || | || || |||||||| | |||| ||| |||| | || |||| Sbjct 403676 TAGCGTGTTCTCTCTCTCATCATTGGCACCTGAAAAATTACCCTTTTGTCTTGCTTTT-- 403733 Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGC 289088 || | |||||||||||||||||| || | | | || | ||||| ||| ||| || Sbjct 403734 -CCTATAGCATCAATTTCGTCAATAAACACAATCGAGGGTGCATTTTCTCTTGCAGTTTT 403792 Query 289089 AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGC 289148 || || |||||||| | | ||| |||| ||||||| |||||||||||||||| ||| | Sbjct 403793 GAACAAATCTCTTACTCTTGCTGCACCAACACCAACAAACATTTCTACAAATTCTGAACC 403852 Query 289149 GGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTT 289208 || || | || | ||| ||||| |||||| |||| | || || | || || Sbjct 403853 AGAAACAAAATAAAACGGAACACCGGCTTCACCTGCTGTTGCCTTTGCAAGCAAAGTTTT 403912 Query 289209 ACCTGTTCCAGGTGGTCC 289226 ||| || || ||||| || Sbjct 403913 ACCGGTACCTGGTGGACC 403930 >seq1 Length=1469393 Score = 102 bits (112), Expect = 2e-16 Identities = 135/184 (73%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 302539 TTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGC 302598 |||||| ||| |||| ||| || ||| || ||||| | | || | ||||||||| Sbjct 196073 TTTCTTGTGGTGTTATCGTAATGAACCATGATATCTTCTAGAGCTTTCACTAAACGACGT 196132 Query 302599 TGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCC 302658 ||||||||||| ||| | |||||| || || ||||| || ||||| ||||||||||| Sbjct 196133 TGAATATAACCTGTTTCGGCTGTTTTGACGGCGGTATCGATAAGACCTTCACGACCACCC 196192 Query 302659 ATAGCATGGAAGAATAGCTCT--TCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGA 302716 || |||||||| || | ||| | |||| | || | ||| | | ||| ||||||| | Sbjct 196193 ATTGCATGGAAAAAAAATTCTTGTGGGGTC-AAACCTCTCAA-ATATGAGTTCTCAACAA 196250 Query 302717 AACC 302720 |||| Sbjct 196251 AACC 196254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471816562828535