Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F002214855.1_202017-07-
05] 55 sequences; 11,944,230 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq3 122 2e-22
seq13 120 7e-22
seq16 98.7 2e-15
>seq3
Length=1017567
Score = 122 bits (134), Expect = 2e-22
Identities = 142/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| || || || || || ||||||| ||| ||||||||| | || || |||
Sbjct 461443 ACCGGTAAGACTATTACCCTGGAAGTTGAATCTTCTGACACTATTGACAATGTCAAGTCC 461502
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||| ||||| || ||||| ||| || ||| |||||| | ||||| || || |||
Sbjct 461503 AAGATCCAAGACAAGGAAGGTATTCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAG 461562
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|| ||||||||||| || |||||| |||| |||||| |||| || || |||||||| |||
Sbjct 461563 CAATTGGAAGATGGTAGAACTTTGTCCGACTACAACATCCAAAAGGAATCTACTCTACAC 461622
Query 206374 CTTGTTTTGAGA 206385
| || ||||||
Sbjct 461623 TTGGTCTTGAGA 461634
Score = 105 bits (116), Expect = 2e-17
Identities = 144/201 (72%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
|||||| || ||||| || || || || | || || ||| ||||||||| | ||
Sbjct 43292 CAAAACTCTAACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCTGACACTATTGACAA 43233
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||| || |||||||| || ||||| ||| || ||| |||||| | || ||
Sbjct 43232 CGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAGCAAAGATTGATTTT 43173
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
||||| ||||| | |||||||| || || || | || ||||| | || || |||||
Sbjct 43172 TGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAATATTCAAAAGGAGTC 43113
Query 206364 TACTCTTCACCTTGTTTTGAG 206384
|||||||||||||| |||||
Sbjct 43112 CACTCTTCACCTTGTCTTGAG 43092
Score = 98.7 bits (108), Expect = 2e-15
Identities = 143/202 (71%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
|||||| || ||||| || || || || | || || ||| ||| ||||| | ||
Sbjct 43520 CAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCCGACACTATTGACAA 43461
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| || ||||||||||| |||||||| || ||||| || ||| | || ||
Sbjct 43460 CGTCAAAAGTAAGATTCAAGATAAAGAAGGTATCCCTCCGGATCAACAGAGATTGATTTT 43401
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
|| || ||||| | |||||||| || || ||| | || |||||| |||| || || ||
Sbjct 43400 TGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAACATCCAAAAGGAATC 43341
Query 206364 TACTCTTCACCTTGTTTTGAGA 206385
|||||||||| | || ||||||
Sbjct 43340 TACTCTTCACTTGGTGTTGAGA 43319
Score = 91.5 bits (100), Expect = 3e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || || | || || ||||| |||||||| || || ||| || |||
Sbjct 43987 CAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCCGAC 43928
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| || || || || || ||||| || || || ||
Sbjct 43927 ACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAACAG 43868
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| | ||||| ||||| |||||| | ||||| || || || ||| | || |||||| ||
Sbjct 43867 AGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAACATC 43808
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385
|| || || |||||||||||| | || ||||||
Sbjct 43807 CAAAAGGAATCTACTCTTCACTTGGTGTTGAGA 43775
Score = 87.8 bits (96), Expect = 4e-12
Identities = 143/204 (70%), Gaps = 4/204 (2%)
Strand=Plus/Minus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
|||||| || ||||| || || || || | || || ||| ||| ||||| | ||
Sbjct 43748 CAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCCGACACTATTGACAA 43689
Query 206244 AGT--AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATC 206301
|| |||| |||| ||||||| || ||||| ||| || || |||||| | ||
Sbjct 43688 CGTCAAAAGTAAAA--TTCAAGACAAGGAAGGTATTCCTCCAGATCAACAAAGATTGATT 43631
Query 206302 TTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAG 206361
|| ||||| ||||| ||||||| || || || || | ||||| ||| | |||||||||
Sbjct 43630 TTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAACATTCAGAAAGAG 43571
Query 206362 TCTACTCTTCACCTTGTTTTGAGA 206385
||||| | || | || ||||||
Sbjct 43570 TCTACGTTGCATTTGGTGTTGAGA 43547
Score = 86.0 bits (94), Expect = 1e-11
Identities = 79/100 (79%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 204757 TCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCC 204816
|||||| || | |||||||||||| || || |||| || ||||||| ||| || || ||
Sbjct 43775 TCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACC 43834
Query 204817 ATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856
||||| |||||||| ||||| ||||| | || ||||||
Sbjct 43835 GTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGA 43874
>seq13
Length=412412
Score = 120 bits (132), Expect = 7e-22
Identities = 152/208 (73%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237
||||| ||| || | || || || || |||||||||||||| ||| ||||||||| |
Sbjct 50448 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 50507
Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297
|| || ||| |||||||||||| || ||||| || || ||| |||||| |
Sbjct 50508 TGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 50567
Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357
||||| || || ||||| |||||||| || || || ||| | || |||||| | || ||
Sbjct 50568 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAA 50627
Query 206358 AGAGTCTACTCTTCACCTTGTTTTGAGA 206385
||| || ||| | ||| | || ||||||
Sbjct 50628 AGAATCCACTTTGCACTTAGTCTTGAGA 50655
>seq16
Length=280166
Score = 98.7 bits (108), Expect = 2e-15
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| || || || |||||||||||||| ||| ||||||||| | || || |||
Sbjct 226910 ACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATTGATAATGTCAAGTCC 226851
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||| ||||| || ||||| || || ||| |||||| | ||||| || || |||
Sbjct 226850 AAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAG 226791
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|| |||||||| || || ||| | | || |||||| |||| || || || ||| | ||
Sbjct 226790 CAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAAGGAATCCACTTTACAT 226731
Query 206374 CTTGTTTTGAGA 206385
| || ||||||
Sbjct 226730 TTGGTCTTGAGA 226719
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181819967185655
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |